Zinc in PDB 8rc4: Structure of Integrator-PP2A Complex

The structure of Structure of Integrator-PP2A Complex also contains other interesting chemical elements:

Manganese

(Mn)

2 atoms

The binding sites of Zinc atom in the Structure of Integrator-PP2A Complex (pdb code 8rc4). This binding sites where shown within 5.0 Angstroms radius around Zinc atom.
In total 2 binding sites of Zinc where determined in the Structure of Integrator-PP2A Complex, PDB code: 8rc4:
Jump to Zinc binding site number: 1; 2;

Zinc binding site 1 out of 2 in the Structure of Integrator-PP2A Complex


Mono view


Stereo pair view

A full contact list of Zinc with other atoms in the Zn binding site number 1 of Structure of Integrator-PP2A Complex within 5.0Å range: probe atom residue distance (Å) B Occ k:Zn1001 b:127.8 occ:1.00 OD2 k:ASP178 2.0 122.1 1.0 NE2 k:HIS73 2.3 124.8 1.0 NE2 k:HIS414 2.3 131.0 1.0 ZN k:ZN1002 2.3 118.9 1.0 CD2 k:HIS73 2.7 122.5 1.0 CE1 k:HIS414 2.8 129.2 1.0 CG k:ASP178 3.1 122.4 1.0 OD2 k:ASP72 3.1 124.9 1.0 OD1 k:ASP72 3.3 120.9 1.0 CG k:ASP72 3.4 122.8 1.0 CD2 k:HIS414 3.5 132.6 1.0 CE1 k:HIS73 3.6 124.2 1.0 OD1 k:ASP178 3.6 125.5 1.0 NE2 k:HIS68 3.8 115.4 1.0 ND1 k:HIS414 4.0 131.5 1.0 CG k:HIS73 4.0 120.8 1.0 CE1 k:HIS68 4.1 116.7 1.0 ND1 k:HIS70 4.2 112.7 1.0 CB k:ASP178 4.3 119.3 1.0 CG k:HIS414 4.3 135.9 1.0 CE1 k:HIS392 4.4 107.3 1.0 ND1 k:HIS73 4.4 121.7 1.0 NE2 k:HIS157 4.4 110.9 1.0 CB k:ASP72 4.7 122.5 1.0 NE2 k:HIS392 4.8 103.1 1.0 CB k:HIS70 4.8 112.8 1.0 CD2 k:HIS157 4.9 111.0 1.0 CG k:HIS70 5.0 111.8 1.0

Zinc binding site 2 out of 2 in the Structure of Integrator-PP2A Complex


Mono view


Stereo pair view

A full contact list of Zinc with other atoms in the Zn binding site number 2 of Structure of Integrator-PP2A Complex within 5.0Å range: probe atom residue distance (Å) B Occ k:Zn1002 b:118.9 occ:1.00 ND1 k:HIS70 2.3 112.7 1.0 NE2 k:HIS68 2.3 115.4 1.0 NE2 k:HIS157 2.3 110.9 1.0 ZN k:ZN1001 2.3 127.8 1.0 OD2 k:ASP178 2.3 122.1 1.0 CD2 k:HIS157 2.9 111.0 1.0 CE1 k:HIS68 3.1 116.7 1.0 CE1 k:HIS70 3.1 110.3 1.0 CG k:ASP178 3.4 122.4 1.0 CD2 k:HIS68 3.4 112.2 1.0 CG k:HIS70 3.4 111.8 1.0 CE1 k:HIS157 3.5 105.8 1.0 CD2 k:HIS73 3.6 122.5 1.0 NE2 k:HIS73 3.7 124.8 1.0 CB k:ASP178 3.7 119.3 1.0 CB k:HIS70 3.8 112.8 1.0 CG k:HIS157 4.1 108.3 1.0 OD1 k:ASP72 4.1 120.9 1.0 CE1 k:HIS392 4.2 107.3 1.0 ND1 k:HIS68 4.3 113.5 1.0 NE2 k:HIS70 4.3 107.6 1.0 ND1 k:HIS157 4.3 105.0 1.0 CG k:HIS68 4.4 111.0 1.0 OD1 k:ASP178 4.4 125.5 1.0 CD2 k:HIS70 4.5 108.8 1.0 NE2 k:HIS414 4.6 131.0 1.0 OD2 k:ASP72 4.7 124.9 1.0 NE2 k:HIS392 4.7 103.1 1.0 CG k:HIS73 4.7 120.8 1.0 CE1 k:HIS414 4.7 129.2 1.0 CG k:ASP72 4.8 122.8 1.0 CE1 k:HIS73 4.8 124.2 1.0

I.Fianu, M.Ochmann, J.L.Walshe, O.Dybkov, J.N.Cruz, H.Urlaub, P.Cramer. Structural Basis of Integrator-Dependent Rna Polymerase II Termination To Be Published.