Zinc in PDB 8okp: Carbonic Anhydrase IX Like Mutant in Complex with STERIOD_SULPHAMOYL Inhibitor AKI_33

Enzymatic activity of Carbonic Anhydrase IX Like Mutant in Complex with STERIOD_SULPHAMOYL Inhibitor AKI_33

All present enzymatic activity of Carbonic Anhydrase IX Like Mutant in Complex with STERIOD_SULPHAMOYL Inhibitor AKI_33:
4.2.1.1;

Protein crystallography data

The structure of Carbonic Anhydrase IX Like Mutant in Complex with STERIOD_SULPHAMOYL Inhibitor AKI_33, PDB code: 8okp was solved by J.Brynda, P.M.Rezacova, E.Kudova, with X-Ray Crystallography technique. A brief refinement statistics is given in the table below:

Resolution Low / High (Å) 39.47 / 1.25
Space group P 1 21 1
Cell size a, b, c (Å), α, β, γ (°) 41.83, 41.2, 72.25, 90, 103.77, 90
R / Rfree (%) 13.2 / 16.5

Zinc Binding Sites:

The binding sites of Zinc atom in the Carbonic Anhydrase IX Like Mutant in Complex with STERIOD_SULPHAMOYL Inhibitor AKI_33 (pdb code 8okp). This binding sites where shown within 5.0 Angstroms radius around Zinc atom.
In total only one binding site of Zinc was determined in the Carbonic Anhydrase IX Like Mutant in Complex with STERIOD_SULPHAMOYL Inhibitor AKI_33, PDB code: 8okp:

Zinc binding site 1 out of 1 in 8okp

Go back to Zinc Binding Sites List in 8okp
Zinc binding site 1 out of 1 in the Carbonic Anhydrase IX Like Mutant in Complex with STERIOD_SULPHAMOYL Inhibitor AKI_33


Mono view


Stereo pair view

A full contact list of Zinc with other atoms in the Zn binding site number 1 of Carbonic Anhydrase IX Like Mutant in Complex with STERIOD_SULPHAMOYL Inhibitor AKI_33 within 5.0Å range:
probe atom residue distance (Å) B Occ
A:Zn301

b:9.3
occ:1.00
N19 A:VQW302 2.0 9.9 1.0
NE2 A:HIS94 2.0 8.8 1.0
NE2 A:HIS96 2.0 9.4 1.0
ND1 A:HIS119 2.0 9.2 1.0
CE1 A:HIS119 2.9 8.9 1.0
CD2 A:HIS94 3.0 9.0 1.0
CD2 A:HIS96 3.0 8.9 1.0
CE1 A:HIS94 3.0 9.7 1.0
CE1 A:HIS96 3.1 10.0 1.0
S22 A:VQW302 3.1 12.9 1.0
O20 A:VQW302 3.1 12.3 1.0
CG A:HIS119 3.2 8.7 1.0
CB A:HIS119 3.6 8.7 1.0
OG1 A:THR198 3.9 9.3 1.0
OE1 A:GLU106 4.0 9.8 1.0
O21 A:VQW302 4.0 11.7 1.0
NE2 A:HIS119 4.1 9.3 1.0
ND1 A:HIS94 4.1 9.7 1.0
CG A:HIS94 4.1 9.2 1.0
ND1 A:HIS96 4.2 10.2 1.0
CG A:HIS96 4.2 9.2 1.0
CD2 A:HIS119 4.2 9.1 1.0
O25 A:VQW302 4.2 12.4 1.0
C3 A:VQW302 4.4 13.0 1.0
CD A:GLU106 4.9 9.5 1.0

Reference:

J.Brynda, P.M.Rezacova, E.Kudova. Carbonic Anhydrase II in Complex with STERIOD_SULPHAMOYL To Be Published.
Page generated: Thu Oct 31 08:50:42 2024

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