Zinc in PDB 8odq: Sufs-Sufu Complex From Mycobacterium Tuberculosis

The structure of Sufs-Sufu Complex From Mycobacterium Tuberculosis, PDB code: 8odq was solved by I.Elchennawi, P.Carpentier, C.Caux, M.Ponge, S.Ollagnier De Choudens, with X-Ray Crystallography technique. A brief refinement statistics is given in the table below:

Resolution Low / High (Å)	48.72 / 1.65
Space group	P 1
Cell size a, b, c (Å), α, β, γ (°)	62.25, 75.553, 75.602, 92.4, 109.57, 99.71
R / Rfree (%)	17.9 / 21.4

The binding sites of Zinc atom in the Sufs-Sufu Complex From Mycobacterium Tuberculosis (pdb code 8odq). This binding sites where shown within 5.0 Angstroms radius around Zinc atom.
In total 2 binding sites of Zinc where determined in the Sufs-Sufu Complex From Mycobacterium Tuberculosis, PDB code: 8odq:
Jump to Zinc binding site number: 1; 2;

Zinc binding site 1 out of 2 in the Sufs-Sufu Complex From Mycobacterium Tuberculosis


Mono view


Stereo pair view

A full contact list of Zinc with other atoms in the Zn binding site number 1 of Sufs-Sufu Complex From Mycobacterium Tuberculosis within 5.0Å range: probe atom residue distance (Å) B Occ A:Zn201 b:28.5 occ:1.00 OD2 A:ASP42 2.0 26.6 1.0 ND1 B:HIS354 2.1 26.7 1.0 SG A:CYS67 2.3 28.9 1.0 SG A:CYS131 2.4 29.1 1.0 CG A:ASP42 2.8 33.1 1.0 CE1 B:HIS354 3.0 30.7 1.0 OD1 A:ASP42 3.1 31.3 1.0 CG B:HIS354 3.2 27.1 1.0 CB A:CYS131 3.3 29.8 1.0 CB A:CYS67 3.3 28.2 1.0 CB B:HIS354 3.6 26.8 1.0 ND2 A:ASN37 3.6 33.4 1.0 CA A:CYS131 4.2 29.9 1.0 NE2 B:HIS354 4.2 29.7 1.0 CB A:ASP42 4.2 34.8 1.0 NH2 A:ARG128 4.2 27.1 1.0 N A:CYS67 4.3 28.3 1.0 NE A:ARG128 4.3 27.4 1.0 CD2 B:HIS354 4.3 33.5 1.0 OG A:SER70 4.4 36.5 1.0 CA A:CYS67 4.4 27.2 1.0 CB A:SER70 4.4 36.3 1.0 CZ A:ARG128 4.7 27.0 1.0 CE1 B:HIS352 4.8 23.2 1.0 CG A:ASN37 4.9 38.2 1.0 N A:SER70 4.9 32.2 1.0 ND1 B:HIS352 5.0 22.4 1.0

Zinc binding site 2 out of 2 in the Sufs-Sufu Complex From Mycobacterium Tuberculosis


Mono view


Stereo pair view

A full contact list of Zinc with other atoms in the Zn binding site number 2 of Sufs-Sufu Complex From Mycobacterium Tuberculosis within 5.0Å range: probe atom residue distance (Å) B Occ C:Zn202 b:26.8 occ:1.00 OD2 C:ASP42 2.0 24.6 1.0 ND1 D:HIS354 2.1 27.2 1.0 SG C:CYS131 2.3 28.2 1.0 SG C:CYS67 2.3 26.2 1.0 CG C:ASP42 2.8 30.8 1.0 CE1 D:HIS354 3.0 27.9 1.0 OD1 C:ASP42 3.0 31.2 1.0 CG D:HIS354 3.2 26.4 1.0 CB C:CYS131 3.3 27.7 1.0 CB C:CYS67 3.4 25.4 1.0 ND2 C:ASN37 3.6 37.6 1.0 CB D:HIS354 3.6 23.9 1.0 NE2 D:HIS354 4.1 29.6 1.0 CA C:CYS131 4.2 26.5 1.0 NE C:ARG128 4.2 27.1 1.0 NH2 C:ARG128 4.2 26.7 1.0 CB C:ASP42 4.2 31.1 1.0 CD2 D:HIS354 4.3 28.5 1.0 N C:CYS67 4.3 27.5 1.0 CA C:CYS67 4.5 26.7 1.0 OG C:SER70 4.5 34.6 1.0 CB C:SER70 4.5 33.4 1.0 CZ C:ARG128 4.7 28.1 1.0 CE1 D:HIS352 4.7 24.2 1.0 CG C:ASN37 4.8 43.5 1.0 ND1 D:HIS352 4.9 23.8 1.0 N C:SER70 5.0 29.0 1.0

I.Elchennawi, P.Carpentier, C.Caux, M.Ponge, S.Ollagnier De Choudens. Structural and Biochemical Characterization of Mycobacterium Tuberculosis Zinc Sufu-Sufs Complex Biomolecules 2023.
ISSN: ESSN 2218-273X
DOI: 10.3390/BIOM13050732