Zinc in PDB 8iq1: Crystal Structure of Hydrogen Sulfide-Bound Superoxide Dismutase in Reduced State
Enzymatic activity of Crystal Structure of Hydrogen Sulfide-Bound Superoxide Dismutase in Reduced State
All present enzymatic activity of Crystal Structure of Hydrogen Sulfide-Bound Superoxide Dismutase in Reduced State:
1.15.1.1;
1.15.1.1;
Protein crystallography data
The structure of Crystal Structure of Hydrogen Sulfide-Bound Superoxide Dismutase in Reduced State, PDB code: 8iq1
was solved by
J.H.Zhou,
W.X.Huang,
R.X.Cheng,
P.J.Zhang,
Y.C.Zhu,
with X-Ray Crystallography technique. A brief refinement statistics is given in the table below:
| Resolution Low / High (Å) | 38.28 / 1.80 |
| Space group | P 1 |
| Cell size a, b, c (Å), α, β, γ (°) | 46.126, 69.961, 91.345, 98.69, 94.83, 103.31 |
| R / Rfree (%) | 18.4 / 21.7 |
Other elements in 8iq1:
The structure of Crystal Structure of Hydrogen Sulfide-Bound Superoxide Dismutase in Reduced State also contains other interesting chemical elements:
| Chlorine | (Cl) | 7 atoms |
| Copper | (Cu) | 10 atoms |
Zinc Binding Sites:
The binding sites of Zinc atom in the Crystal Structure of Hydrogen Sulfide-Bound Superoxide Dismutase in Reduced State
(pdb code 8iq1). This binding sites where shown within
5.0 Angstroms radius around Zinc atom.
In total 8 binding sites of Zinc where determined in the Crystal Structure of Hydrogen Sulfide-Bound Superoxide Dismutase in Reduced State, PDB code: 8iq1:
Jump to Zinc binding site number: 1; 2; 3; 4; 5; 6; 7; 8;
In total 8 binding sites of Zinc where determined in the Crystal Structure of Hydrogen Sulfide-Bound Superoxide Dismutase in Reduced State, PDB code: 8iq1:
Jump to Zinc binding site number: 1; 2; 3; 4; 5; 6; 7; 8;
Zinc binding site 1 out of 8 in 8iq1
Go back to
Zinc Binding Sites List in 8iq1
Zinc binding site 1 out
of 8 in the Crystal Structure of Hydrogen Sulfide-Bound Superoxide Dismutase in Reduced State
Mono view
Stereo pair view
Mono view
Stereo pair view
A full contact list of Zinc with other atoms in the Zn binding
site number 1 of Crystal Structure of Hydrogen Sulfide-Bound Superoxide Dismutase in Reduced State within 5.0Å range:
|
Zinc binding site 2 out of 8 in 8iq1
Go back to
Zinc Binding Sites List in 8iq1
Zinc binding site 2 out
of 8 in the Crystal Structure of Hydrogen Sulfide-Bound Superoxide Dismutase in Reduced State
Mono view
Stereo pair view
Mono view
Stereo pair view
A full contact list of Zinc with other atoms in the Zn binding
site number 2 of Crystal Structure of Hydrogen Sulfide-Bound Superoxide Dismutase in Reduced State within 5.0Å range:
|
Zinc binding site 3 out of 8 in 8iq1
Go back to
Zinc Binding Sites List in 8iq1
Zinc binding site 3 out
of 8 in the Crystal Structure of Hydrogen Sulfide-Bound Superoxide Dismutase in Reduced State
Mono view
Stereo pair view
Mono view
Stereo pair view
A full contact list of Zinc with other atoms in the Zn binding
site number 3 of Crystal Structure of Hydrogen Sulfide-Bound Superoxide Dismutase in Reduced State within 5.0Å range:
|
Zinc binding site 4 out of 8 in 8iq1
Go back to
Zinc Binding Sites List in 8iq1
Zinc binding site 4 out
of 8 in the Crystal Structure of Hydrogen Sulfide-Bound Superoxide Dismutase in Reduced State
Mono view
Stereo pair view
Mono view
Stereo pair view
A full contact list of Zinc with other atoms in the Zn binding
site number 4 of Crystal Structure of Hydrogen Sulfide-Bound Superoxide Dismutase in Reduced State within 5.0Å range:
|
Zinc binding site 5 out of 8 in 8iq1
Go back to
Zinc Binding Sites List in 8iq1
Zinc binding site 5 out
of 8 in the Crystal Structure of Hydrogen Sulfide-Bound Superoxide Dismutase in Reduced State
Mono view
Stereo pair view
Mono view
Stereo pair view
A full contact list of Zinc with other atoms in the Zn binding
site number 5 of Crystal Structure of Hydrogen Sulfide-Bound Superoxide Dismutase in Reduced State within 5.0Å range:
|
Zinc binding site 6 out of 8 in 8iq1
Go back to
Zinc Binding Sites List in 8iq1
Zinc binding site 6 out
of 8 in the Crystal Structure of Hydrogen Sulfide-Bound Superoxide Dismutase in Reduced State
Mono view
Stereo pair view
Mono view
Stereo pair view
A full contact list of Zinc with other atoms in the Zn binding
site number 6 of Crystal Structure of Hydrogen Sulfide-Bound Superoxide Dismutase in Reduced State within 5.0Å range:
|
Zinc binding site 7 out of 8 in 8iq1
Go back to
Zinc Binding Sites List in 8iq1
Zinc binding site 7 out
of 8 in the Crystal Structure of Hydrogen Sulfide-Bound Superoxide Dismutase in Reduced State
Mono view
Stereo pair view
Mono view
Stereo pair view
A full contact list of Zinc with other atoms in the Zn binding
site number 7 of Crystal Structure of Hydrogen Sulfide-Bound Superoxide Dismutase in Reduced State within 5.0Å range:
|
Zinc binding site 8 out of 8 in 8iq1
Go back to
Zinc Binding Sites List in 8iq1
Zinc binding site 8 out
of 8 in the Crystal Structure of Hydrogen Sulfide-Bound Superoxide Dismutase in Reduced State
Mono view
Stereo pair view
Mono view
Stereo pair view
A full contact list of Zinc with other atoms in the Zn binding
site number 8 of Crystal Structure of Hydrogen Sulfide-Bound Superoxide Dismutase in Reduced State within 5.0Å range:
|
Reference:
D.D.Wu,
S.Jin,
R.X.Cheng,
W.J.Cai,
W.L.Xue,
Q.Q.Zhang,
L.J.Yang,
Q.Zhu,
M.Y.Li,
G.Lin,
Y.Z.Wang,
X.P.Mu,
Y.Wang,
I.Y.Zhang,
Q.Zhang,
Y.Chen,
S.Y.Cai,
B.Tan,
Y.Li,
Y.Q.Chen,
P.J.Zhang,
C.Sun,
Y.Yin,
M.J.Wang,
Y.Z.Zhu,
B.B.Tao,
J.H.Zhou,
W.X.Huang,
Y.C.Zhu.
Hydrogen Sulfide Functions As A Micro-Modulator Bound at the Copper Active Site of Cu/Zn-Sod to Regulate the Catalytic Activity of the Enzyme. Cell Rep V. 42 12750 2023.
ISSN: ESSN 2211-1247
PubMed: 37421623
DOI: 10.1016/J.CELREP.2023.112750
Page generated: Thu Oct 31 07:55:30 2024
ISSN: ESSN 2211-1247
PubMed: 37421623
DOI: 10.1016/J.CELREP.2023.112750
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