Zinc in PDB 8hme: Head Module State 1 of Tetrahymena Ift-A

The binding sites of Zinc atom in the Head Module State 1 of Tetrahymena Ift-A (pdb code 8hme). This binding sites where shown within 5.0 Angstroms radius around Zinc atom.
In total 2 binding sites of Zinc where determined in the Head Module State 1 of Tetrahymena Ift-A, PDB code: 8hme:
Jump to Zinc binding site number: 1; 2;

Zinc binding site 1 out of 2 in the Head Module State 1 of Tetrahymena Ift-A


Mono view


Stereo pair view

A full contact list of Zinc with other atoms in the Zn binding site number 1 of Head Module State 1 of Tetrahymena Ift-A within 5.0Å range: probe atom residue distance (Å) B Occ A:Zn2001 b:200.7 occ:1.00 SG A:CYS1047 2.3 132.4 1.0 SG A:CYS1063 2.3 147.2 1.0 SG A:CYS1060 2.3 147.4 1.0 SG A:CYS1044 2.3 145.0 1.0 CB A:CYS1047 3.3 132.4 1.0 N A:CYS1063 3.5 147.2 1.0 CB A:CYS1063 3.5 147.2 1.0 CB A:CYS1044 3.6 145.0 1.0 CB A:CYS1060 3.7 147.4 1.0 CA A:CYS1063 3.9 147.2 1.0 O A:ASN1045 4.1 128.4 1.0 CB A:SER1062 4.2 147.0 1.0 O A:CYS1063 4.3 147.2 1.0 C A:CYS1063 4.4 147.2 1.0 C A:SER1062 4.4 147.0 1.0 CA A:CYS1047 4.6 132.4 1.0 CA A:SER1062 4.7 147.0 1.0 OG A:SER1062 4.7 147.0 1.0 N A:CYS1047 4.8 132.4 1.0 N A:SER1062 4.8 147.0 1.0 CA A:CYS1044 4.9 145.0 1.0 CA A:CYS1060 5.0 147.4 1.0 CB A:HIS1065 5.0 131.4 1.0

Zinc binding site 2 out of 2 in the Head Module State 1 of Tetrahymena Ift-A


Mono view


Stereo pair view

A full contact list of Zinc with other atoms in the Zn binding site number 2 of Head Module State 1 of Tetrahymena Ift-A within 5.0Å range: probe atom residue distance (Å) B Occ A:Zn2002 b:205.0 occ:1.00 CB A:CYS1235 2.0 138.8 1.0 SG A:CYS1213 2.3 124.4 1.0 SG A:CYS1210 2.3 124.7 1.0 SG A:CYS1235 2.3 138.8 1.0 SG A:CYS1232 2.4 134.9 1.0 CB A:CYS1213 3.3 124.4 1.0 CA A:CYS1235 3.3 138.8 1.0 CB A:CYS1210 3.4 124.7 1.0 CB A:CYS1232 3.6 134.9 1.0 N A:CYS1235 3.8 138.8 1.0 N A:CYS1213 3.8 124.4 1.0 CA A:CYS1213 4.2 124.4 1.0 C A:CYS1235 4.5 138.8 1.0 OG1 A:THR1215 4.5 114.7 1.0 CB A:GLU1212 4.6 119.1 1.0 CA A:CYS1210 4.7 124.7 1.0 C A:GLU1212 4.7 119.1 1.0 OE1 A:GLU1212 4.8 119.1 1.0 O A:CYS1210 5.0 124.7 1.0 CA A:CYS1232 5.0 134.9 1.0 C A:CYS1210 5.0 124.7 1.0

Y.Ma, J.He, S.Li, D.Yao, C.Huang, J.Wu, M.Lei. Structural Insight Into the Intraflagellar Transport Complex Ift-A and Its Assembly in the Anterograde Ift Train. Nat Commun V. 14 1506 2023.
ISSN: ESSN 2041-1723
PubMed: 36932088
DOI: 10.1038/S41467-023-37208-2