Zinc in PDB 8hio: Cryo-Em Structure of the CAS12M2-Crrna Binary Complex

Other elements in 8hio:

The structure of Cryo-Em Structure of the CAS12M2-Crrna Binary Complex also contains other interesting chemical elements:

Magnesium (Mg) 1 atom

Zinc Binding Sites:

The binding sites of Zinc atom in the Cryo-Em Structure of the CAS12M2-Crrna Binary Complex (pdb code 8hio). This binding sites where shown within 5.0 Angstroms radius around Zinc atom.
In total only one binding site of Zinc was determined in the Cryo-Em Structure of the CAS12M2-Crrna Binary Complex, PDB code: 8hio:

Zinc binding site 1 out of 1 in 8hio

Go back to Zinc Binding Sites List in 8hio
Zinc binding site 1 out of 1 in the Cryo-Em Structure of the CAS12M2-Crrna Binary Complex


Mono view


Stereo pair view

A full contact list of Zinc with other atoms in the Zn binding site number 1 of Cryo-Em Structure of the CAS12M2-Crrna Binary Complex within 5.0Å range:
probe atom residue distance (Å) B Occ
A:Zn601

b:221.4
occ:1.00
ND1 A:HIS549 2.0 175.1 1.0
SG A:CYS552 2.3 185.3 1.0
SG A:CYS572 2.3 196.8 1.0
SG A:CYS569 2.3 190.9 1.0
CB A:CYS552 2.6 185.3 1.0
CB A:CYS572 2.8 196.8 1.0
CE1 A:HIS549 2.8 175.1 1.0
CB A:CYS569 3.1 190.9 1.0
CG A:HIS549 3.2 175.1 1.0
CB A:HIS549 3.6 175.1 1.0
CA A:CYS552 3.7 185.3 1.0
N A:CYS552 3.8 185.3 1.0
N A:CYS572 3.8 196.8 1.0
CA A:CYS572 3.9 196.8 1.0
NE2 A:HIS549 4.0 175.1 1.0
CD2 A:HIS549 4.2 175.1 1.0
C A:GLY571 4.4 191.1 1.0
CA A:CYS569 4.6 190.9 1.0
C A:CYS552 4.7 185.3 1.0
C A:CYS572 4.9 196.8 1.0
CA A:GLY571 4.9 191.1 1.0
N A:GLY571 4.9 191.1 1.0
C A:ARG551 5.0 181.7 1.0
O A:GLY571 5.0 191.1 1.0

Reference:

S.Omura, N.S.Omura, R.Nakagawa, Y.W.Wu, C.Sudfeld, V.R.Warren, H.Hirano, T.Kusakizako, Y.Kise, H.G.J.Lebbink, Y.Itoh, V.D.J.Oost, O.Nureki. N/A N/A.
Page generated: Wed Apr 26 00:48:02 2023

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