Zinc in PDB 8hhm: Cryo-Em Structure of the CAS12M2-Crrna-Target Dna Ternary Complex Intermediate State

The structure of Cryo-Em Structure of the CAS12M2-Crrna-Target Dna Ternary Complex Intermediate State also contains other interesting chemical elements:

Magnesium

(Mg)

1 atom

The binding sites of Zinc atom in the Cryo-Em Structure of the CAS12M2-Crrna-Target Dna Ternary Complex Intermediate State (pdb code 8hhm). This binding sites where shown within 5.0 Angstroms radius around Zinc atom.
In total only one binding site of Zinc was determined in the Cryo-Em Structure of the CAS12M2-Crrna-Target Dna Ternary Complex Intermediate State, PDB code: 8hhm:

Zinc binding site 1 out of 1 in the Cryo-Em Structure of the CAS12M2-Crrna-Target Dna Ternary Complex Intermediate State


Mono view


Stereo pair view

A full contact list of Zinc with other atoms in the Zn binding site number 1 of Cryo-Em Structure of the CAS12M2-Crrna-Target Dna Ternary Complex Intermediate State within 5.0Å range: probe atom residue distance (Å) B Occ A:Zn601 b:237.6 occ:1.00 ND1 A:HIS549 2.0 181.1 1.0 CB A:CYS552 2.3 185.0 1.0 SG A:CYS552 2.3 189.3 1.0 SG A:CYS569 2.3 191.6 1.0 SG A:CYS572 2.4 192.2 1.0 N A:CYS572 2.4 189.9 1.0 CE1 A:HIS549 2.5 179.7 1.0 CB A:CYS572 2.8 188.3 1.0 CA A:CYS572 3.1 188.0 1.0 CG A:HIS549 3.3 178.8 1.0 CB A:CYS569 3.4 186.1 1.0 C A:GLY571 3.4 192.3 1.0 CA A:CYS552 3.6 184.6 1.0 N A:GLY573 3.7 183.7 1.0 CA A:GLY571 3.7 192.1 1.0 NE2 A:HIS549 3.7 177.2 1.0 N A:CYS552 3.7 185.4 1.0 C A:CYS572 3.9 188.0 1.0 N A:GLY571 4.0 193.2 1.0 CB A:HIS549 4.1 177.7 1.0 CD2 A:HIS549 4.1 176.6 1.0 O A:GLY571 4.6 192.2 1.0 C A:CYS552 4.6 183.9 1.0 C A:ARG551 4.7 176.0 1.0 CA A:CYS569 4.8 186.5 1.0 CA A:GLY573 5.0 182.5 1.0

S.Omura, N.S.Omura, R.Nakagawa, Y.W.Wu, C.Sudfeld, V.R.Warren, H.Hirano, T.Kusakizako, Y.Kise, H.G.J.Lebbink, Y.Itoh, V.D.J.Oost, O.Nureki. N/A N/A.