Zinc in PDB 8gio: Structure of Ternary Complex of Mouse Cgas with Dsdna and Bound Atp: with 10MM MG2+ and 0.1MM MN2+

Enzymatic activity of Structure of Ternary Complex of Mouse Cgas with Dsdna and Bound Atp: with 10MM MG2+ and 0.1MM MN2+

All present enzymatic activity of Structure of Ternary Complex of Mouse Cgas with Dsdna and Bound Atp: with 10MM MG2+ and 0.1MM MN2+:
2.7.7.86;

Protein crystallography data

The structure of Structure of Ternary Complex of Mouse Cgas with Dsdna and Bound Atp: with 10MM MG2+ and 0.1MM MN2+, PDB code: 8gio was solved by S.Wu, J.Sohn, with X-Ray Crystallography technique. A brief refinement statistics is given in the table below:

Resolution Low / High (Å) 28.80 / 2.67
Space group P 21 21 21
Cell size a, b, c (Å), α, β, γ (°) 77.594, 98.624, 141.929, 90, 90, 90
R / Rfree (%) 18.3 / 24.1

Other elements in 8gio:

The structure of Structure of Ternary Complex of Mouse Cgas with Dsdna and Bound Atp: with 10MM MG2+ and 0.1MM MN2+ also contains other interesting chemical elements:

Manganese (Mn) 4 atoms

Zinc Binding Sites:

The binding sites of Zinc atom in the Structure of Ternary Complex of Mouse Cgas with Dsdna and Bound Atp: with 10MM MG2+ and 0.1MM MN2+ (pdb code 8gio). This binding sites where shown within 5.0 Angstroms radius around Zinc atom.
In total 2 binding sites of Zinc where determined in the Structure of Ternary Complex of Mouse Cgas with Dsdna and Bound Atp: with 10MM MG2+ and 0.1MM MN2+, PDB code: 8gio:
Jump to Zinc binding site number: 1; 2;

Zinc binding site 1 out of 2 in 8gio

Go back to Zinc Binding Sites List in 8gio
Zinc binding site 1 out of 2 in the Structure of Ternary Complex of Mouse Cgas with Dsdna and Bound Atp: with 10MM MG2+ and 0.1MM MN2+


Mono view


Stereo pair view

A full contact list of Zinc with other atoms in the Zn binding site number 1 of Structure of Ternary Complex of Mouse Cgas with Dsdna and Bound Atp: with 10MM MG2+ and 0.1MM MN2+ within 5.0Å range:
probe atom residue distance (Å) B Occ
A:Zn602

b:50.4
occ:1.00
NE2 A:HIS378 2.0 42.6 1.0
SG A:CYS385 2.3 43.4 1.0
SG A:CYS384 2.3 39.8 1.0
SG A:CYS392 2.3 40.7 1.0
CD2 A:HIS378 2.9 37.4 1.0
CE1 A:HIS378 3.1 38.7 1.0
CB A:CYS392 3.2 41.6 1.0
CB A:CYS385 3.2 41.1 1.0
CB A:CYS384 3.7 36.3 1.0
N A:CYS392 3.8 42.7 1.0
N A:CYS385 3.8 39.1 1.0
C A:CYS384 3.8 39.0 1.0
CA A:CYS392 4.0 41.5 1.0
CA A:CYS385 4.0 39.0 1.0
CG A:HIS378 4.1 42.0 1.0
ND1 A:HIS378 4.1 39.9 1.0
O A:CYS384 4.2 38.9 1.0
CA A:CYS384 4.3 37.5 1.0
NH1 A:ARG394 4.4 40.8 1.0
C A:CYS392 4.5 42.6 1.0
O A:CYS392 4.6 48.9 1.0
O A:ALA390 4.8 45.0 1.0
C A:LYS391 4.9 46.7 1.0

Zinc binding site 2 out of 2 in 8gio

Go back to Zinc Binding Sites List in 8gio
Zinc binding site 2 out of 2 in the Structure of Ternary Complex of Mouse Cgas with Dsdna and Bound Atp: with 10MM MG2+ and 0.1MM MN2+


Mono view


Stereo pair view

A full contact list of Zinc with other atoms in the Zn binding site number 2 of Structure of Ternary Complex of Mouse Cgas with Dsdna and Bound Atp: with 10MM MG2+ and 0.1MM MN2+ within 5.0Å range:
probe atom residue distance (Å) B Occ
C:Zn602

b:49.0
occ:1.00
NE2 C:HIS378 2.1 46.1 1.0
SG C:CYS385 2.3 46.0 1.0
SG C:CYS384 2.3 45.9 1.0
SG C:CYS392 2.4 44.1 1.0
CD2 C:HIS378 3.0 42.3 1.0
CE1 C:HIS378 3.2 40.3 1.0
CB C:CYS385 3.2 46.3 1.0
CB C:CYS392 3.3 46.9 1.0
CB C:CYS384 3.8 42.1 1.0
N C:CYS392 3.8 45.2 1.0
C C:CYS384 3.8 44.8 1.0
N C:CYS385 3.9 46.8 1.0
O C:CYS384 4.1 42.3 1.0
CA C:CYS392 4.1 47.8 1.0
CA C:CYS385 4.1 46.2 1.0
CG C:HIS378 4.2 44.7 1.0
NH1 C:ARG394 4.2 46.8 1.0
ND1 C:HIS378 4.3 44.5 1.0
CA C:CYS384 4.3 42.1 1.0
C C:CYS392 4.6 49.5 1.0
O C:ALA390 4.7 51.4 1.0
O C:CYS392 4.8 52.4 1.0
C C:LYS391 4.8 49.0 1.0

Reference:

S.Wu, J.Sohn. Structure of Ternary Complex of Mouse Cgas with Dsdna and Bound Atp: with 10MM MG2+ and 0.1MM MN2+ To Be Published.
Page generated: Wed Oct 30 20:52:58 2024

Last articles

Zn in 9MJ5
Zn in 9HNW
Zn in 9G0L
Zn in 9FNE
Zn in 9DZN
Zn in 9E0I
Zn in 9D32
Zn in 9DAK
Zn in 8ZXC
Zn in 8ZUF
© Copyright 2008-2020 by atomistry.com
Home   |    Site Map   |    Copyright   |    Contact us   |    Privacy