Atomistry » Zinc » PDB 8fyh-8gbl » 8g66
Atomistry »
  Zinc »
    PDB 8fyh-8gbl »
      8g66 »

Zinc in PDB 8g66: Structure with SJ3149

Enzymatic activity of Structure with SJ3149

All present enzymatic activity of Structure with SJ3149:
2.7.11.1;

Protein crystallography data

The structure of Structure with SJ3149, PDB code: 8g66 was solved by D.J.Miller, S.M.Young, M.Fischer, with X-Ray Crystallography technique. A brief refinement statistics is given in the table below:

Resolution Low / High (Å) 48.25 / 3.45
Space group P 1
Cell size a, b, c (Å), α, β, γ (°) 86.66, 109.71, 112.34, 105.49, 94.41, 100.03
R / Rfree (%) 21.3 / 27.2

Zinc Binding Sites:

The binding sites of Zinc atom in the Structure with SJ3149 (pdb code 8g66). This binding sites where shown within 5.0 Angstroms radius around Zinc atom.
In total 2 binding sites of Zinc where determined in the Structure with SJ3149, PDB code: 8g66:
Jump to Zinc binding site number: 1; 2;

Zinc binding site 1 out of 2 in 8g66

Go back to Zinc Binding Sites List in 8g66
Zinc binding site 1 out of 2 in the Structure with SJ3149


Mono view


Stereo pair view

A full contact list of Zinc with other atoms in the Zn binding site number 1 of Structure with SJ3149 within 5.0Å range:
probe atom residue distance (Å) B Occ
B:Zn501

b:111.0
occ:1.00
SG B:CYS391 2.3 105.9 1.0
SG B:CYS394 2.3 107.3 1.0
SG B:CYS323 2.4 117.3 1.0
SG B:CYS326 2.4 109.7 1.0
CB B:CYS391 2.9 105.0 1.0
CB B:CYS394 3.3 112.5 1.0
CB B:CYS323 3.5 106.4 1.0
N B:CYS394 3.7 124.3 1.0
CB B:CYS326 3.7 110.9 1.0
N B:CYS326 4.0 113.3 1.0
CA B:CYS394 4.1 116.1 1.0
CA B:CYS391 4.3 102.8 1.0
CA B:CYS326 4.5 113.5 1.0
CB B:GLN325 4.5 108.4 1.0
C B:CYS391 4.7 104.7 1.0
C B:CYS394 4.7 114.5 1.0
CB B:ILE393 4.8 132.3 1.0
C B:ILE393 4.8 138.9 1.0
N B:ALA395 4.8 114.5 1.0
N B:ILE393 4.8 129.1 1.0
C B:GLN325 4.8 113.5 1.0
CB B:THR329 4.9 114.3 1.0
OG1 B:THR329 4.9 122.5 1.0
CA B:CYS323 4.9 105.8 1.0
O B:CYS391 4.9 110.8 1.0

Zinc binding site 2 out of 2 in 8g66

Go back to Zinc Binding Sites List in 8g66
Zinc binding site 2 out of 2 in the Structure with SJ3149


Mono view


Stereo pair view

A full contact list of Zinc with other atoms in the Zn binding site number 2 of Structure with SJ3149 within 5.0Å range:
probe atom residue distance (Å) B Occ
E:Zn501

b:115.3
occ:1.00
SG E:CYS391 2.3 107.6 1.0
SG E:CYS326 2.3 127.7 1.0
SG E:CYS323 2.4 135.3 1.0
SG E:CYS394 2.4 116.2 1.0
CB E:CYS391 3.1 105.2 1.0
CB E:CYS323 3.2 129.9 1.0
CB E:CYS394 3.3 108.9 1.0
CB E:CYS326 3.6 129.1 1.0
N E:CYS394 4.0 109.2 1.0
N E:CYS326 4.1 127.2 1.0
CA E:CYS394 4.2 114.0 1.0
CB E:GLN325 4.4 125.6 1.0
CA E:CYS326 4.5 133.8 1.0
CA E:CYS391 4.5 103.1 1.0
CA E:CYS323 4.6 131.7 1.0
OG E:SER396 4.6 107.3 1.0
CB E:THR329 4.7 133.5 1.0
OG1 E:THR329 4.8 135.5 1.0
C E:CYS394 4.8 114.2 1.0
CD1 E:ILE398 4.9 106.2 1.0
C E:GLN325 4.9 127.5 1.0
C E:CYS391 4.9 103.3 1.0
CG2 E:THR329 5.0 124.8 1.0
CB E:SER396 5.0 107.6 1.0
N E:ALA395 5.0 112.7 1.0

Reference:

D.J.Miller, S.M.Young, M.Fischer. Structure of Ternary Complex with Molecular Glue Targeting CK1A For Degradation By the CRL4CRBN Ubiquitin Ligase To Be Published.
Page generated: Wed Oct 30 20:45:28 2024

Last articles

Zn in 9JPJ
Zn in 9JP7
Zn in 9JPK
Zn in 9JPL
Zn in 9GN6
Zn in 9GN7
Zn in 9GKU
Zn in 9GKW
Zn in 9GKX
Zn in 9GL0
© Copyright 2008-2020 by atomistry.com
Home   |    Site Map   |    Copyright   |    Contact us   |    Privacy