Zinc in PDB 8fzr: Cryoem Structure of Yeast Arginyltransferase 1 (ATE1)

Enzymatic activity of Cryoem Structure of Yeast Arginyltransferase 1 (ATE1)

All present enzymatic activity of Cryoem Structure of Yeast Arginyltransferase 1 (ATE1):
2.3.2.8;

Zinc Binding Sites:

The binding sites of Zinc atom in the Cryoem Structure of Yeast Arginyltransferase 1 (ATE1) (pdb code 8fzr). This binding sites where shown within 5.0 Angstroms radius around Zinc atom.
In total only one binding site of Zinc was determined in the Cryoem Structure of Yeast Arginyltransferase 1 (ATE1), PDB code: 8fzr:

Zinc binding site 1 out of 1 in 8fzr

Go back to Zinc Binding Sites List in 8fzr
Zinc binding site 1 out of 1 in the Cryoem Structure of Yeast Arginyltransferase 1 (ATE1)


Mono view


Stereo pair view

A full contact list of Zinc with other atoms in the Zn binding site number 1 of Cryoem Structure of Yeast Arginyltransferase 1 (ATE1) within 5.0Å range:
probe atom residue distance (Å) B Occ
A:Zn601

b:0.0
occ:1.00
SG A:CYS23 2.3 0.0 1.0
SG A:CYS95 2.3 0.0 1.0
SG A:CYS20 2.4 0.0 1.0
SG A:CYS94 2.5 0.0 1.0
ND2 A:ASN55 2.8 0.0 1.0
CG A:ASN55 3.1 0.0 1.0
CB A:CYS20 3.3 0.0 1.0
CB A:CYS95 3.4 0.0 1.0
OD1 A:ASN55 3.6 0.0 1.0
CB A:ASN55 3.8 0.0 1.0
CB A:CYS94 3.9 0.0 1.0
N A:CYS95 4.0 0.0 1.0
CB A:CYS23 4.0 0.0 1.0
C A:CYS94 4.1 0.0 1.0
CA A:CYS95 4.3 0.0 1.0
O A:CYS94 4.4 0.0 1.0
CA A:ASN55 4.5 0.0 1.0
CA A:CYS94 4.5 0.0 1.0
CA A:CYS20 4.6 0.0 1.0
N A:CYS23 4.9 0.0 1.0
OD1 A:ASN93 4.9 0.0 1.0
N A:CYS94 5.0 0.0 1.0
CA A:CYS23 5.0 0.0 1.0

Reference:

T.Abeywansha, W.Huang, X.Ye, A.Nawrocki, X.Lan, E.Jankowsky, D.J.Taylor, Y.Zhang. The Structural Basis of Trna Recognition By Arginyl-Trna-Protein Transferase Nat Commun V. 14 2232 2023.
ISSN: ESSN 2041-1723
DOI: 10.1038/S41467-023-38004-8
Page generated: Wed Oct 30 20:38:32 2024

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