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Zinc in PDB 8fwn: Crystal Structure of Sars-Cov-2 Papain-Like Protease C111S Mutant

Enzymatic activity of Crystal Structure of Sars-Cov-2 Papain-Like Protease C111S Mutant

All present enzymatic activity of Crystal Structure of Sars-Cov-2 Papain-Like Protease C111S Mutant:
3.4.19.12;

Protein crystallography data

The structure of Crystal Structure of Sars-Cov-2 Papain-Like Protease C111S Mutant, PDB code: 8fwn was solved by E.H.S.Bezerra, A.S.Soprano, C.C.C.Tonoli, P.F.V.Prado, J.C.Da Silva, K.G.Franchini, D.B.B.Trivella, C.E.Benedetti, with X-Ray Crystallography technique. A brief refinement statistics is given in the table below:

Resolution Low / High (Å) 44.80 / 1.50
Space group P 32 2 1
Cell size a, b, c (Å), α, β, γ (°) 82.8, 82.8, 134.396, 90, 90, 120
R / Rfree (%) 18.2 / 19.8

Other elements in 8fwn:

The structure of Crystal Structure of Sars-Cov-2 Papain-Like Protease C111S Mutant also contains other interesting chemical elements:

Chlorine (Cl) 1 atom

Zinc Binding Sites:

The binding sites of Zinc atom in the Crystal Structure of Sars-Cov-2 Papain-Like Protease C111S Mutant (pdb code 8fwn). This binding sites where shown within 5.0 Angstroms radius around Zinc atom.
In total only one binding site of Zinc was determined in the Crystal Structure of Sars-Cov-2 Papain-Like Protease C111S Mutant, PDB code: 8fwn:

Zinc binding site 1 out of 1 in 8fwn

Go back to Zinc Binding Sites List in 8fwn
Zinc binding site 1 out of 1 in the Crystal Structure of Sars-Cov-2 Papain-Like Protease C111S Mutant


Mono view


Stereo pair view

A full contact list of Zinc with other atoms in the Zn binding site number 1 of Crystal Structure of Sars-Cov-2 Papain-Like Protease C111S Mutant within 5.0Å range:
probe atom residue distance (Å) B Occ
A:Zn409

b:25.1
occ:0.00
 SG A:CYS226 2.3 22.1 1.0
SG A:CYS224 2.3 22.5 1.0
SG A:CYS192 2.3 25.8 1.0
SG A:CYS189 2.3 22.4 1.0
CB A:CYS226 3.2 24.8 1.0
CB A:CYS224 3.3 24.9 1.0
CB A:CYS189 3.3 22.0 1.0
CB A:CYS192 3.4 30.3 1.0
N A:CYS192 3.8 26.4 1.0
N A:CYS226 4.1 24.8 1.0
CB A:THR191 4.2 25.3 1.0
CA A:CYS192 4.2 26.2 1.0
CA A:CYS226 4.2 24.8 1.0
CA A:CYS224 4.7 25.0 1.0
O A:HOH948 4.7 31.4 1.0
C A:THR191 4.7 31.4 1.0
CA A:CYS189 4.7 24.5 1.0
CG2 A:THR191 4.8 32.8 1.0
CA A:THR191 4.8 24.4 1.0
N A:THR191 4.9 23.6 1.0
C A:CYS224 5.0 27.0 1.0
C A:CYS226 5.0 31.6 1.0

Reference:

E.H.S.Bezerra, A.S.Soprano, C.C.C.Tonoli, P.F.V.Prado, J.C.Da Silva, K.G.Franchini, D.B.B.Trivella, C.E.Benedetti. Crystal Structure of Sars-Cov-2 Papain-Like Protease C111S Mutant To Be Published.
Page generated: Wed Oct 30 20:37:25 2024

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