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Zinc in PDB 8frk: Structure of NSP14 N7-Methyltransferase Domain Fused with Telsam Bound to SGC8158

Enzymatic activity of Structure of NSP14 N7-Methyltransferase Domain Fused with Telsam Bound to SGC8158

All present enzymatic activity of Structure of NSP14 N7-Methyltransferase Domain Fused with Telsam Bound to SGC8158:
2.1.1.56;

Protein crystallography data

The structure of Structure of NSP14 N7-Methyltransferase Domain Fused with Telsam Bound to SGC8158, PDB code: 8frk was solved by J.Kottur, A.K.Aggarwal, with X-Ray Crystallography technique. A brief refinement statistics is given in the table below:

Resolution Low / High (Å) 47.27 / 1.61
Space group P 65
Cell size a, b, c (Å), α, β, γ (°) 109.174, 109.174, 48.659, 90, 90, 120
R / Rfree (%) 21.7 / 25.1

Other elements in 8frk:

The structure of Structure of NSP14 N7-Methyltransferase Domain Fused with Telsam Bound to SGC8158 also contains other interesting chemical elements:

Chlorine (Cl) 1 atom
Potassium (K) 1 atom

Zinc Binding Sites:

The binding sites of Zinc atom in the Structure of NSP14 N7-Methyltransferase Domain Fused with Telsam Bound to SGC8158 (pdb code 8frk). This binding sites where shown within 5.0 Angstroms radius around Zinc atom.
In total only one binding site of Zinc was determined in the Structure of NSP14 N7-Methyltransferase Domain Fused with Telsam Bound to SGC8158, PDB code: 8frk:

Zinc binding site 1 out of 1 in 8frk

Go back to Zinc Binding Sites List in 8frk
Zinc binding site 1 out of 1 in the Structure of NSP14 N7-Methyltransferase Domain Fused with Telsam Bound to SGC8158


Mono view


Stereo pair view

A full contact list of Zinc with other atoms in the Zn binding site number 1 of Structure of NSP14 N7-Methyltransferase Domain Fused with Telsam Bound to SGC8158 within 5.0Å range:
probe atom residue distance (Å) B Occ
A:Zn601

b:25.6
occ:1.00
 ND1 A:HIS487 2.1 21.4 1.0
SG A:CYS484 2.3 29.5 1.0
SG A:CYS477 2.3 23.9 1.0
SG A:CYS452 2.3 27.7 1.0
CE1 A:HIS487 3.0 22.4 1.0
CB A:CYS452 3.1 22.7 1.0
CB A:CYS477 3.1 28.9 1.0
CG A:HIS487 3.3 24.5 1.0
CB A:CYS484 3.5 29.3 1.0
CA A:CYS452 3.7 31.6 1.0
CB A:HIS487 3.7 20.0 1.0
N A:CYS484 4.0 27.9 1.0
N A:CYS477 4.1 24.9 1.0
NE2 A:HIS487 4.2 21.8 1.0
CA A:CYS477 4.2 29.7 1.0
CD2 A:HIS487 4.3 27.4 1.0
CA A:CYS484 4.3 31.1 1.0
N A:CYS452 4.5 30.8 1.0
OG1 A:THR475 4.5 18.9 1.0
N A:HIS487 4.6 27.4 1.0
CB A:THR475 4.7 21.2 1.0
C A:CYS452 4.8 29.7 1.0
CA A:HIS487 4.8 22.9 1.0
N A:GLU453 4.9 26.8 1.0

Reference:

J.Kottur, A.K.Aggarwal. Structure of NSP14 N7-Methyltransferase Domain Fused with Telsam Bound to SGC8158 To Be Published.
Page generated: Wed Oct 30 20:36:17 2024

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