Zinc in PDB 8e3q: Cryo-Em Structure of the Human Mpsf

The binding sites of Zinc atom in the Cryo-Em Structure of the Human Mpsf (pdb code 8e3q). This binding sites where shown within 5.0 Angstroms radius around Zinc atom.
In total only one binding site of Zinc was determined in the Cryo-Em Structure of the Human Mpsf, PDB code: 8e3q:

Zinc binding site 1 out of 1 in the Cryo-Em Structure of the Human Mpsf


Mono view


Stereo pair view

A full contact list of Zinc with other atoms in the Zn binding site number 1 of Cryo-Em Structure of the Human Mpsf within 5.0Å range: probe atom residue distance (Å) B Occ C:Zn301 b:89.6 occ:1.00 NE2 C:HIS59 2.1 75.1 1.0 SG C:CYS49 2.3 80.8 1.0 SG C:CYS41 2.3 72.5 1.0 SG C:CYS55 2.3 77.7 1.0 CE1 C:HIS59 3.0 75.1 1.0 CD2 C:HIS59 3.1 75.1 1.0 CB C:CYS41 3.2 72.5 1.0 CB C:CYS55 3.2 77.7 1.0 CB C:CYS49 3.8 80.8 1.0 ND1 C:HIS59 4.1 75.1 1.0 CG C:HIS59 4.2 75.1 1.0 O C:LYS51 4.3 82.1 1.0 CB C:PHE44 4.5 76.7 1.0 CB C:PHE57 4.6 70.2 1.0 CA C:CYS41 4.6 72.5 1.0 O C:PHE57 4.6 70.2 1.0 OE1 C:GLN22 4.7 65.3 1.0 CA C:CYS55 4.7 77.7 1.0 N C:PHE44 4.9 76.7 1.0 CA C:CYS49 5.0 80.8 1.0

P.A.Gutierrez, J.Wei, Y.Sun, L.Tong. Molecular Basis For the Recognition of the Auuaaa Polyadenylation Signal By Mpsf. Rna V. 28 1534 2022.
ISSN: ESSN 1469-9001
PubMed: 36130077
DOI: 10.1261/RNA.079322.122