Zinc in PDB 8cgk: Lincomycin and Avilamycin Bound to the 50S Subunit

The structure of Lincomycin and Avilamycin Bound to the 50S Subunit also contains other interesting chemical elements:

Potassium	(K)	81 atoms
Magnesium	(Mg)	260 atoms
Chlorine	(Cl)	2 atoms

The binding sites of Zinc atom in the Lincomycin and Avilamycin Bound to the 50S Subunit (pdb code 8cgk). This binding sites where shown within 5.0 Angstroms radius around Zinc atom.
In total only one binding site of Zinc was determined in the Lincomycin and Avilamycin Bound to the 50S Subunit, PDB code: 8cgk:

Zinc binding site 1 out of 1 in the Lincomycin and Avilamycin Bound to the 50S Subunit


Mono view


Stereo pair view

A full contact list of Zinc with other atoms in the Zn binding site number 1 of Lincomycin and Avilamycin Bound to the 50S Subunit within 5.0Å range: probe atom residue distance (Å) B Occ 3:Zn101 b:28.9 occ:1.00 ND1 3:HIS33 2.1 28.1 1.0 SG 3:CYS27 2.3 32.0 1.0 SG 3:CYS11 2.3 33.5 1.0 SG 3:CYS14 2.3 28.8 1.0 CE1 3:HIS33 3.1 30.7 1.0 CG 3:HIS33 3.1 26.9 1.0 CB 3:CYS27 3.4 34.6 1.0 CB 3:HIS33 3.4 25.1 1.0 CB 3:CYS11 3.5 34.9 1.0 N 3:CYS14 3.6 35.8 1.0 CB 3:CYS14 3.6 31.5 1.0 N 3:CYS11 3.7 37.1 1.0 CA 3:CYS14 3.8 33.1 1.0 CA 3:CYS11 4.0 37.4 1.0 NE2 3:HIS33 4.2 29.2 1.0 CD2 3:HIS33 4.2 28.0 1.0 C 3:ASN13 4.2 38.6 1.0 C 3:CYS11 4.4 40.2 1.0 O 3:CYS11 4.4 40.6 1.0 C 3:LEU10 4.5 37.0 1.0 CA 3:CYS27 4.6 35.6 1.0 CB 3:GLU30 4.6 44.9 1.0 CB 3:LEU10 4.7 36.6 1.0 N 3:ASN13 4.7 41.1 1.0 CB 3:ASN13 4.7 43.6 1.0 N 3:LEU10 4.8 34.0 1.0 CA 3:ASN13 4.8 40.8 1.0 O 3:ASN13 4.9 37.7 1.0 CA 3:LEU10 4.9 36.3 1.0 CA 3:HIS33 4.9 24.3 1.0

H.Paternoga, C.Crowe-Mcauliffe, L.V.Bock, T.O.Koller, M.Morici, B.Beckert, A.G.Myasnikov, H.Grubmueller, J.Novacek, D.N.Wilson. Structural Conservation of Antibiotic Interaction with Ribosomes To Be Published.