Zinc in PDB 7y6y: Rlgsgg-ATPRT6 Ubr Box (C121)

All present enzymatic activity of Rlgsgg-ATPRT6 Ubr Box (C121):
2.3.2.27;

The structure of Rlgsgg-ATPRT6 Ubr Box (C121), PDB code: 7y6y was solved by L.Kim, H.K.Song, with X-Ray Crystallography technique. A brief refinement statistics is given in the table below:

Resolution Low / High (Å)	24.74 / 1.54
Space group	C 1 2 1
Cell size a, b, c (Å), α, β, γ (°)	60.706, 87.128, 60.777, 90, 98.43, 90
R / Rfree (%)	22.6 / 24.3

Pages:

>>> Page 1 <<< Page 2, Binding sites: 11 - 12;

Binding sites:

The binding sites of Zinc atom in the Rlgsgg-ATPRT6 Ubr Box (C121) (pdb code 7y6y). This binding sites where shown within 5.0 Angstroms radius around Zinc atom.
In total 12 binding sites of Zinc where determined in the Rlgsgg-ATPRT6 Ubr Box (C121), PDB code: 7y6y:
Jump to Zinc binding site number: 1; 2; 3; 4; 5; 6; 7; 8; 9; 10;

Zinc binding site 1 out of 12 in the Rlgsgg-ATPRT6 Ubr Box (C121)


Mono view


Stereo pair view

A full contact list of Zinc with other atoms in the Zn binding site number 1 of Rlgsgg-ATPRT6 Ubr Box (C121) within 5.0Å range: probe atom residue distance (Å) B Occ A:Zn201 b:14.9 occ:1.00 ND1 A:HIS187 2.0 18.2 1.0 SG A:CYS172 2.3 15.7 1.0 SG A:CYS184 2.3 15.3 1.0 SG A:CYS149 2.4 12.8 1.0 HB3 A:CYS172 2.9 18.2 1.0 CE1 A:HIS187 2.9 20.0 1.0 HB2 A:HIS187 2.9 21.4 1.0 HE1 A:HIS187 3.0 24.1 1.0 CG A:HIS187 3.1 19.7 1.0 HB3 A:CYS184 3.1 18.0 1.0 CB A:CYS172 3.1 15.1 1.0 HB3 A:CYS149 3.2 14.8 1.0 H A:CYS184 3.3 19.6 1.0 CB A:CYS184 3.3 15.0 1.0 CB A:CYS149 3.4 12.3 1.0 CB A:HIS187 3.5 17.8 1.0 HA A:CYS149 3.5 17.4 1.0 HB2 A:CYS172 3.5 18.2 1.0 HB2 A:CYS121 3.5 23.4 1.0 CA A:CYS149 4.0 14.4 1.0 NE2 A:HIS187 4.0 23.3 1.0 N A:CYS184 4.0 16.3 1.0 HB2 A:CYS184 4.1 18.0 1.0 HB3 A:HIS187 4.1 21.4 1.0 CD2 A:HIS187 4.1 22.9 1.0 HB2 A:CYS149 4.2 14.8 1.0 CA A:CYS184 4.2 15.3 1.0 HB2 A:ASN186 4.2 23.8 1.0 H A:HIS187 4.2 23.2 1.0 O A:HOH308 4.4 25.7 1.0 ZN A:ZN202 4.4 13.8 1.0 N A:HIS187 4.4 19.3 1.0 CA A:CYS172 4.4 12.9 1.0 CB A:CYS121 4.5 19.4 1.0 H A:ASN186 4.5 22.9 1.0 C A:CYS172 4.6 16.2 1.0 CA A:HIS187 4.6 21.7 1.0 O A:CYS172 4.7 16.8 1.0 C A:CYS184 4.7 16.8 1.0 HB3 A:CYS121 4.8 23.4 1.0 HE2 A:HIS187 4.8 28.0 1.0 O A:CYS184 4.8 16.9 1.0 HA A:CYS172 4.9 15.5 1.0 C A:CYS149 5.0 13.8 1.0 O A:CYS149 5.0 14.4 1.0

Zinc binding site 2 out of 12 in the Rlgsgg-ATPRT6 Ubr Box (C121)


Mono view


Stereo pair view

A full contact list of Zinc with other atoms in the Zn binding site number 2 of Rlgsgg-ATPRT6 Ubr Box (C121) within 5.0Å range: probe atom residue distance (Å) B Occ A:Zn202 b:13.8 occ:1.00 SG A:CYS121 2.3 17.9 1.0 SG A:CYS146 2.3 14.1 1.0 SG A:CYS170 2.3 13.2 1.0 SG A:CYS149 2.4 12.8 1.0 HB2 A:CYS149 3.0 14.8 1.0 HB3 A:CYS170 3.1 17.1 1.0 HB3 A:CYS121 3.1 23.4 1.0 CB A:CYS121 3.1 19.4 1.0 CB A:CYS170 3.1 14.2 1.0 HB2 A:CYS121 3.2 23.4 1.0 H A:CYS146 3.2 13.3 1.0 HB2 A:CYS170 3.2 17.1 1.0 CB A:CYS149 3.3 12.3 1.0 HB3 A:CYS146 3.4 16.4 1.0 HB3 A:CYS172 3.4 18.2 1.0 CB A:CYS146 3.5 13.6 1.0 HB3 A:SER123 3.8 32.7 1.0 HB3 A:CYS149 3.8 14.8 1.0 H A:CYS149 3.9 17.1 1.0 HB2 A:CYS172 4.0 18.2 1.0 N A:CYS146 4.0 11.1 1.0 HE1 A:HIS187 4.1 24.1 1.0 CB A:CYS172 4.2 15.1 1.0 HB2 A:CYS146 4.3 16.4 1.0 CA A:CYS146 4.3 14.3 1.0 H A:CYS172 4.3 14.6 1.0 H A:SER123 4.4 30.6 1.0 ZN A:ZN201 4.4 14.9 1.0 HB2 A:SER123 4.5 32.7 1.0 CA A:CYS149 4.5 14.4 1.0 N A:CYS149 4.5 14.2 1.0 HB A:ILE145 4.5 16.1 1.0 CB A:SER123 4.6 27.2 1.0 CE1 A:HIS187 4.6 20.0 1.0 CA A:CYS170 4.6 14.8 1.0 CA A:CYS121 4.6 24.6 1.0 HA A:CYS149 4.8 17.4 1.0 HA A:ILE145 4.8 11.2 1.0 O A:CYS146 4.9 11.7 1.0 ND1 A:HIS187 4.9 18.2 1.0 C A:CYS146 4.9 12.8 1.0 HA A:CYS121 4.9 29.6 1.0 HA A:CYS170 5.0 17.8 1.0

Zinc binding site 3 out of 12 in the Rlgsgg-ATPRT6 Ubr Box (C121)


Mono view


Stereo pair view

A full contact list of Zinc with other atoms in the Zn binding site number 3 of Rlgsgg-ATPRT6 Ubr Box (C121) within 5.0Å range: probe atom residue distance (Å) B Occ A:Zn203 b:15.1 occ:1.00 ND1 A:HIS155 2.0 13.9 1.0 ND1 A:HIS158 2.0 15.8 1.0 SG A:CYS134 2.3 14.9 1.0 SG A:CYS137 2.3 15.9 1.0 CE1 A:HIS155 2.9 16.6 1.0 CE1 A:HIS158 2.9 20.1 1.0 HE1 A:HIS155 3.0 20.0 1.0 HE1 A:HIS158 3.0 24.2 1.0 HB3 A:HIS155 3.1 21.7 1.0 HB2 A:CYS137 3.1 16.6 1.0 CG A:HIS155 3.1 13.8 1.0 CG A:HIS158 3.1 17.0 1.0 HB3 A:HIS158 3.2 20.0 1.0 HB A:THR136 3.3 21.5 1.0 CB A:CYS137 3.4 13.8 1.0 CB A:CYS134 3.4 15.5 1.0 HB3 A:CYS134 3.4 18.7 1.0 CB A:HIS158 3.6 16.6 1.0 HB2 A:CYS134 3.6 18.7 1.0 CB A:HIS155 3.6 18.0 1.0 HB2 A:HIS158 3.6 20.0 1.0 HA A:HIS155 3.7 24.5 1.0 H A:CYS137 3.7 14.5 1.0 N A:CYS137 4.0 12.1 1.0 NE2 A:HIS155 4.1 16.7 1.0 NE2 A:HIS158 4.1 22.8 1.0 HB3 A:CYS137 4.1 16.6 1.0 CA A:HIS155 4.2 20.3 1.0 CD2 A:HIS155 4.2 14.7 1.0 CD2 A:HIS158 4.2 22.0 1.0 CB A:THR136 4.3 17.9 1.0 CA A:CYS137 4.3 11.2 1.0 HZ2 A:TRP178 4.4 14.2 1.0 HB2 A:HIS155 4.4 21.7 1.0 H A:THR136 4.6 15.6 1.0 O A:ASP154 4.7 21.1 1.0 HA A:CYS137 4.7 13.6 1.0 HG22 A:THR136 4.7 24.9 1.0 HA3 A:GLY182 4.7 19.0 1.0 HA2 A:GLY182 4.7 19.0 1.0 C A:THR136 4.7 16.6 1.0 CA A:CYS134 4.7 13.0 1.0 HB3 A:TYR160 4.8 18.1 1.0 HE1 A:PHE150 4.8 17.4 1.0 HE2 A:HIS155 4.8 20.1 1.0 HE2 A:HIS158 4.8 27.4 1.0 CG2 A:THR136 4.9 20.6 1.0 CA A:THR136 4.9 15.8 1.0 HA A:CYS134 5.0 15.7 1.0 HG21 A:THR136 5.0 24.9 1.0

Zinc binding site 4 out of 12 in the Rlgsgg-ATPRT6 Ubr Box (C121)


Mono view


Stereo pair view

A full contact list of Zinc with other atoms in the Zn binding site number 4 of Rlgsgg-ATPRT6 Ubr Box (C121) within 5.0Å range: probe atom residue distance (Å) B Occ B:Zn201 b:15.1 occ:1.00 ND1 B:HIS187 2.0 18.6 1.0 SG B:CYS172 2.3 15.8 1.0 SG B:CYS184 2.3 15.4 1.0 SG B:CYS149 2.4 14.6 1.0 CE1 B:HIS187 2.9 21.1 1.0 HB3 B:CYS172 2.9 17.4 1.0 HB2 B:HIS187 2.9 21.0 1.0 HE1 B:HIS187 3.0 25.4 1.0 CG B:HIS187 3.1 20.8 1.0 HB3 B:CYS149 3.1 14.6 1.0 CB B:CYS172 3.1 14.5 1.0 HB3 B:CYS184 3.2 18.7 1.0 CB B:CYS149 3.3 12.2 1.0 H B:CYS184 3.3 20.3 1.0 CB B:CYS184 3.4 15.5 1.0 CB B:HIS187 3.5 17.5 1.0 HA B:CYS149 3.5 16.4 1.0 HB2 B:CYS172 3.6 17.4 1.0 HB2 B:CYS121 3.6 26.9 1.0 CA B:CYS149 4.0 13.7 1.0 NE2 B:HIS187 4.0 25.6 1.0 N B:CYS184 4.0 16.9 1.0 HB3 B:HIS187 4.1 21.0 1.0 HB2 B:CYS149 4.1 14.6 1.0 HB2 B:CYS184 4.1 18.7 1.0 CD2 B:HIS187 4.1 22.9 1.0 CA B:CYS184 4.2 14.8 1.0 H B:HIS187 4.2 23.7 1.0 HB2 B:ASN186 4.3 26.3 1.0 ZN B:ZN202 4.4 14.8 1.0 N B:HIS187 4.4 19.7 1.0 CA B:CYS172 4.5 13.8 1.0 CB B:CYS121 4.5 22.4 1.0 H B:ASN186 4.5 23.4 1.0 C B:CYS172 4.6 16.1 1.0 CA B:HIS187 4.6 21.8 1.0 C B:CYS184 4.8 16.4 1.0 O B:CYS172 4.8 16.7 1.0 HE2 B:HIS187 4.8 30.8 1.0 HB3 B:CYS121 4.8 26.9 1.0 O B:CYS184 4.8 16.6 1.0 HA B:CYS172 4.9 16.7 1.0 C B:CYS149 4.9 14.1 1.0 O B:CYS149 5.0 13.7 1.0

Zinc binding site 5 out of 12 in the Rlgsgg-ATPRT6 Ubr Box (C121)


Mono view


Stereo pair view

A full contact list of Zinc with other atoms in the Zn binding site number 5 of Rlgsgg-ATPRT6 Ubr Box (C121) within 5.0Å range: probe atom residue distance (Å) B Occ B:Zn202 b:14.8 occ:1.00 SG B:CYS121 2.3 18.4 1.0 SG B:CYS170 2.3 11.9 1.0 SG B:CYS149 2.4 14.6 1.0 SG B:CYS146 2.4 13.5 1.0 HB2 B:CYS149 3.0 14.6 1.0 HB3 B:CYS121 3.1 26.9 1.0 CB B:CYS121 3.1 22.4 1.0 HB3 B:CYS170 3.1 16.8 1.0 HB2 B:CYS121 3.1 26.9 1.0 CB B:CYS170 3.1 13.9 1.0 HB2 B:CYS170 3.2 16.8 1.0 H B:CYS146 3.2 11.1 1.0 HB3 B:CYS146 3.3 17.2 1.0 CB B:CYS149 3.3 12.2 1.0 HB3 B:CYS172 3.5 17.4 1.0 CB B:CYS146 3.5 14.3 1.0 HB3 B:SER123 3.7 34.8 1.0 HB3 B:CYS149 3.8 14.6 1.0 H B:CYS149 3.9 18.9 1.0 HB2 B:CYS172 4.0 17.4 1.0 N B:CYS146 4.0 9.2 1.0 HE1 B:HIS187 4.0 25.4 1.0 CB B:CYS172 4.2 14.5 1.0 HB2 B:CYS146 4.2 17.2 1.0 CA B:CYS146 4.3 12.9 1.0 H B:SER123 4.3 31.1 1.0 H B:CYS172 4.3 15.6 1.0 ZN B:ZN201 4.4 15.1 1.0 HB B:ILE145 4.4 16.6 1.0 HB2 B:SER123 4.5 34.8 1.0 N B:CYS149 4.5 15.7 1.0 CA B:CYS149 4.5 13.7 1.0 CB B:SER123 4.5 28.9 1.0 CE1 B:HIS187 4.6 21.1 1.0 CA B:CYS121 4.6 24.6 1.0 CA B:CYS170 4.6 15.3 1.0 HA B:CYS149 4.8 16.4 1.0 HA B:ILE145 4.9 13.4 1.0 HA B:CYS121 4.9 29.6 1.0 O B:CYS146 4.9 10.3 1.0 C B:CYS146 4.9 10.6 1.0 ND1 B:HIS187 4.9 18.6 1.0 HA B:CYS170 5.0 18.4 1.0

Zinc binding site 6 out of 12 in the Rlgsgg-ATPRT6 Ubr Box (C121)


Mono view


Stereo pair view

A full contact list of Zinc with other atoms in the Zn binding site number 6 of Rlgsgg-ATPRT6 Ubr Box (C121) within 5.0Å range: probe atom residue distance (Å) B Occ B:Zn203 b:15.1 occ:1.00 ND1 B:HIS155 2.0 13.8 1.0 ND1 B:HIS158 2.0 15.8 1.0 SG B:CYS134 2.3 14.9 1.0 SG B:CYS137 2.3 16.1 1.0 CE1 B:HIS155 2.9 15.5 1.0 CE1 B:HIS158 2.9 19.8 1.0 HE1 B:HIS155 3.0 18.7 1.0 HE1 B:HIS158 3.0 23.8 1.0 HB2 B:CYS137 3.1 16.8 1.0 CG B:HIS158 3.2 16.3 1.0 CG B:HIS155 3.2 13.6 1.0 HB3 B:HIS155 3.2 20.7 1.0 HB3 B:HIS158 3.2 20.4 1.0 HB B:THR136 3.3 21.8 1.0 CB B:CYS137 3.4 13.9 1.0 CB B:CYS134 3.4 14.9 1.0 HB3 B:CYS134 3.4 18.0 1.0 CB B:HIS158 3.6 17.0 1.0 HB2 B:CYS134 3.6 18.0 1.0 HB2 B:HIS158 3.6 20.4 1.0 CB B:HIS155 3.6 17.2 1.0 HA B:HIS155 3.7 24.2 1.0 H B:CYS137 3.7 15.1 1.0 N B:CYS137 4.0 12.5 1.0 NE2 B:HIS155 4.1 15.2 1.0 NE2 B:HIS158 4.1 22.0 1.0 HB3 B:CYS137 4.1 16.8 1.0 CD2 B:HIS155 4.2 14.1 1.0 CA B:HIS155 4.2 20.1 1.0 CD2 B:HIS158 4.2 22.4 1.0 CB B:THR136 4.3 18.1 1.0 CA B:CYS137 4.3 12.1 1.0 HZ2 B:TRP178 4.4 13.2 1.0 HB2 B:HIS155 4.5 20.7 1.0 H B:THR136 4.5 16.4 1.0 O B:ASP154 4.6 21.4 1.0 HA3 B:GLY182 4.7 18.5 1.0 HA B:CYS137 4.7 14.6 1.0 HA2 B:GLY182 4.7 18.5 1.0 C B:THR136 4.7 15.9 1.0 CA B:CYS134 4.7 12.6 1.0 HG22 B:THR136 4.7 24.9 1.0 HB3 B:TYR160 4.8 18.6 1.0 HE2 B:HIS155 4.8 18.3 1.0 HE1 B:PHE150 4.8 17.0 1.0 HE2 B:HIS158 4.8 26.5 1.0 CA B:THR136 4.9 15.0 1.0 HA B:CYS134 4.9 15.1 1.0 HG1 B:THR136 4.9 23.4 1.0 CG2 B:THR136 4.9 20.7 1.0 HG21 B:THR136 5.0 24.9 1.0

Zinc binding site 7 out of 12 in the Rlgsgg-ATPRT6 Ubr Box (C121)


Mono view


Stereo pair view

A full contact list of Zinc with other atoms in the Zn binding site number 7 of Rlgsgg-ATPRT6 Ubr Box (C121) within 5.0Å range: probe atom residue distance (Å) B Occ C:Zn201 b:14.8 occ:1.00 ND1 C:HIS187 2.0 17.1 1.0 SG C:CYS172 2.3 16.3 1.0 SG C:CYS184 2.3 15.8 1.0 SG C:CYS149 2.4 14.1 1.0 HB3 C:CYS172 2.8 17.0 1.0 CE1 C:HIS187 2.9 19.4 1.0 HB2 C:HIS187 2.9 19.3 1.0 HB3 C:CYS149 3.0 15.5 1.0 HE1 C:HIS187 3.1 23.4 1.0 CG C:HIS187 3.1 18.7 1.0 CB C:CYS172 3.1 14.1 1.0 HB3 C:CYS184 3.2 19.6 1.0 CB C:CYS149 3.3 12.8 1.0 H C:CYS184 3.3 19.2 1.0 CB C:CYS184 3.4 16.2 1.0 HB2 C:CYS172 3.5 17.0 1.0 CB C:HIS187 3.5 16.0 1.0 HB2 C:CYS121 3.5 22.2 1.0 HA C:CYS149 3.6 15.9 1.0 CA C:CYS149 4.0 13.2 1.0 N C:CYS184 4.0 15.9 1.0 HB2 C:CYS149 4.1 15.5 1.0 NE2 C:HIS187 4.1 21.6 1.0 HB3 C:HIS187 4.1 19.3 1.0 HB2 C:CYS184 4.1 19.6 1.0 CD2 C:HIS187 4.2 21.4 1.0 CA C:CYS184 4.2 15.3 1.0 HB2 C:ASN186 4.3 25.1 1.0 H C:HIS187 4.3 23.0 1.0 ZN C:ZN202 4.4 14.3 1.0 CA C:CYS172 4.4 11.8 1.0 CB C:CYS121 4.5 18.4 1.0 N C:HIS187 4.5 19.1 1.0 H C:ASN186 4.5 22.4 1.0 C C:CYS172 4.6 16.4 1.0 CA C:HIS187 4.6 19.6 1.0 O C:CYS172 4.7 16.8 1.0 HB3 C:CYS121 4.7 22.2 1.0 C C:CYS184 4.7 17.4 1.0 O C:CYS184 4.8 17.0 1.0 HE2 C:HIS187 4.8 25.9 1.0 HA C:CYS172 4.9 14.2 1.0 C C:CYS149 5.0 15.0 1.0 HA C:PHE183 5.0 18.4 1.0 O C:CYS149 5.0 14.6 1.0

Zinc binding site 8 out of 12 in the Rlgsgg-ATPRT6 Ubr Box (C121)


Mono view


Stereo pair view

A full contact list of Zinc with other atoms in the Zn binding site number 8 of Rlgsgg-ATPRT6 Ubr Box (C121) within 5.0Å range: probe atom residue distance (Å) B Occ C:Zn202 b:14.3 occ:1.00 SG C:CYS170 2.3 12.7 1.0 SG C:CYS121 2.3 18.4 1.0 SG C:CYS146 2.4 14.5 1.0 SG C:CYS149 2.4 14.1 1.0 HB2 C:CYS149 3.0 15.5 1.0 HB3 C:CYS170 3.1 18.1 1.0 HB3 C:CYS121 3.2 22.2 1.0 CB C:CYS170 3.2 15.1 1.0 CB C:CYS121 3.2 18.4 1.0 H C:CYS146 3.2 14.2 1.0 HB2 C:CYS121 3.2 22.2 1.0 HB2 C:CYS170 3.2 18.1 1.0 CB C:CYS149 3.3 12.8 1.0 HB3 C:CYS146 3.4 16.8 1.0 HB3 C:CYS172 3.5 17.0 1.0 CB C:CYS146 3.5 14.0 1.0 H C:CYS149 3.9 15.9 1.0 HB3 C:CYS149 3.9 15.5 1.0 N C:CYS146 3.9 11.8 1.0 HB2 C:CYS172 4.0 17.0 1.0 HB3 C:SER123 4.0 36.3 1.0 HE1 C:HIS187 4.1 23.4 1.0 CB C:CYS172 4.2 14.1 1.0 HG C:SER123 4.2 50.1 1.0 OG C:SER123 4.2 41.7 1.0 HB2 C:CYS146 4.3 16.8 1.0 CA C:CYS146 4.3 12.6 1.0 H C:SER123 4.3 34.3 1.0 H C:CYS172 4.3 14.9 1.0 ZN C:ZN201 4.4 14.8 1.0 HB C:ILE145 4.4 15.0 1.0 N C:CYS149 4.5 13.2 1.0 CA C:CYS149 4.5 13.2 1.0 CE1 C:HIS187 4.6 19.4 1.0 CA C:CYS170 4.6 15.6 1.0 CA C:CYS121 4.6 25.4 1.0 CB C:SER123 4.7 30.2 1.0 HA C:ILE145 4.8 13.5 1.0 HA C:CYS149 4.9 15.9 1.0 O C:CYS146 4.9 11.7 1.0 C C:CYS146 4.9 12.2 1.0 ND1 C:HIS187 4.9 17.1 1.0 HA C:CYS121 5.0 30.5 1.0 HA C:CYS170 5.0 18.7 1.0

Zinc binding site 9 out of 12 in the Rlgsgg-ATPRT6 Ubr Box (C121)


Mono view


Stereo pair view

A full contact list of Zinc with other atoms in the Zn binding site number 9 of Rlgsgg-ATPRT6 Ubr Box (C121) within 5.0Å range: probe atom residue distance (Å) B Occ C:Zn203 b:15.2 occ:1.00 ND1 C:HIS158 2.1 16.9 1.0 ND1 C:HIS155 2.1 13.8 1.0 SG C:CYS134 2.3 14.7 1.0 SG C:CYS137 2.4 16.4 1.0 CE1 C:HIS158 2.9 19.8 1.0 CE1 C:HIS155 3.0 16.6 1.0 HE1 C:HIS158 3.0 23.8 1.0 HE1 C:HIS155 3.1 20.0 1.0 HB3 C:HIS155 3.1 21.5 1.0 CG C:HIS158 3.2 18.2 1.0 CG C:HIS155 3.2 15.2 1.0 HB2 C:CYS137 3.2 16.5 1.0 HB3 C:HIS158 3.2 20.6 1.0 HB C:THR136 3.3 21.9 1.0 CB C:CYS134 3.4 15.0 1.0 HB3 C:CYS134 3.4 18.0 1.0 CB C:CYS137 3.4 13.7 1.0 HB2 C:CYS134 3.6 18.0 1.0 CB C:HIS158 3.6 17.1 1.0 CB C:HIS155 3.6 17.9 1.0 HB2 C:HIS158 3.6 20.6 1.0 HA C:HIS155 3.6 22.2 1.0 H C:CYS137 3.7 16.4 1.0 N C:CYS137 4.0 13.6 1.0 NE2 C:HIS158 4.1 23.2 1.0 NE2 C:HIS155 4.1 16.4 1.0 HB3 C:CYS137 4.2 16.5 1.0 CA C:HIS155 4.2 18.5 1.0 CB C:THR136 4.2 18.2 1.0 CD2 C:HIS158 4.2 22.9 1.0 CD2 C:HIS155 4.2 14.7 1.0 CA C:CYS137 4.3 11.8 1.0 HZ2 C:TRP178 4.4 15.0 1.0 HB2 C:HIS155 4.4 21.5 1.0 H C:THR136 4.6 16.9 1.0 HG22 C:THR136 4.6 24.7 1.0 HA C:CYS137 4.6 14.2 1.0 C C:THR136 4.7 15.8 1.0 CA C:CYS134 4.7 12.0 1.0 O C:ASP154 4.7 21.3 1.0 HA2 C:GLY182 4.7 17.6 1.0 HB3 C:TYR160 4.7 17.7 1.0 HA3 C:GLY182 4.7 17.6 1.0 HE1 C:PHE150 4.8 18.8 1.0 CG2 C:THR136 4.8 20.6 1.0 HG21 C:THR136 4.8 24.7 1.0 HE2 C:HIS158 4.8 27.9 1.0 HE2 C:HIS155 4.9 19.7 1.0 CA C:THR136 4.9 14.7 1.0 HA C:CYS134 4.9 14.4 1.0 HG1 C:THR136 4.9 23.6 1.0

Zinc binding site 10 out of 12 in the Rlgsgg-ATPRT6 Ubr Box (C121)


Mono view


Stereo pair view

A full contact list of Zinc with other atoms in the Zn binding site number 10 of Rlgsgg-ATPRT6 Ubr Box (C121) within 5.0Å range: probe atom residue distance (Å) B Occ D:Zn201 b:14.9 occ:1.00 ND1 D:HIS187 2.0 16.4 1.0 SG D:CYS172 2.3 16.0 1.0 SG D:CYS184 2.3 15.8 1.0 SG D:CYS149 2.4 13.8 1.0 HB3 D:CYS172 2.8 16.1 1.0 CE1 D:HIS187 2.9 20.7 1.0 HB2 D:HIS187 2.9 19.6 1.0 HB3 D:CYS149 3.0 15.6 1.0 HE1 D:HIS187 3.0 24.9 1.0 CG D:HIS187 3.1 18.5 1.0 CB D:CYS172 3.1 13.3 1.0 HB3 D:CYS184 3.2 18.8 1.0 CB D:CYS149 3.2 13.0 1.0 H D:CYS184 3.3 18.4 1.0 CB D:CYS184 3.4 15.6 1.0 CB D:HIS187 3.5 16.3 1.0 HB2 D:CYS172 3.5 16.1 1.0 HB2 D:CYS121 3.5 23.8 1.0 HA D:CYS149 3.6 15.7 1.0 CA D:CYS149 4.0 13.0 1.0 N D:CYS184 4.0 15.3 1.0 HB2 D:CYS149 4.1 15.6 1.0 NE2 D:HIS187 4.1 21.3 1.0 HB3 D:HIS187 4.1 19.6 1.0 HB2 D:CYS184 4.1 18.8 1.0 CD2 D:HIS187 4.2 21.1 1.0 CA D:CYS184 4.2 15.0 1.0 HB2 D:ASN186 4.2 24.1 1.0 H D:HIS187 4.3 24.3 1.0 ZN D:ZN202 4.4 14.1 1.0 CA D:CYS172 4.4 12.5 1.0 CB D:CYS121 4.5 19.8 1.0 N D:HIS187 4.5 20.2 1.0 H D:ASN186 4.5 22.3 1.0 C D:CYS172 4.6 15.9 1.0 CA D:HIS187 4.6 20.3 1.0 O D:CYS172 4.7 16.7 1.0 C D:CYS184 4.7 17.1 1.0 HB3 D:CYS121 4.7 23.8 1.0 O D:CYS184 4.8 17.0 1.0 HE2 D:HIS187 4.8 25.7 1.0 HA D:CYS172 4.9 15.0 1.0 C D:CYS149 4.9 14.8 1.0 O D:CYS149 5.0 14.9 1.0 HA D:PHE183 5.0 18.4 1.0

L.Kim, C.C.Lin, T.J.Lin, Y.C.Cao, M.C.Chen, M.Y.Chou, W.H.Lin, M.Kim, J.L.Wu, M.C.Shih, H.K.Song, M.C.Ho. Structural Analyses of Plant PRT6-Ubr Box For Cys-Arg/N-Degron Pathway and Insights Into the Plant Submergence Resistance To Be Published.