Zinc in PDB 7y01: Crystal Structure of ZMMCM10 in Complex with 16NT Ssdna at 2.8. Angstrom Resolution

The structure of Crystal Structure of ZMMCM10 in Complex with 16NT Ssdna at 2.8. Angstrom Resolution, PDB code: 7y01 was solved by X.Du, J.Du, with X-Ray Crystallography technique. A brief refinement statistics is given in the table below:

Resolution Low / High (Å)	36.88 / 2.80
Space group	P 32 2 1
Cell size a, b, c (Å), α, β, γ (°)	85.18, 85.18, 103.912, 90, 90, 120
R / Rfree (%)	19.9 / 24.3

The binding sites of Zinc atom in the Crystal Structure of ZMMCM10 in Complex with 16NT Ssdna at 2.8. Angstrom Resolution (pdb code 7y01). This binding sites where shown within 5.0 Angstroms radius around Zinc atom.
In total only one binding site of Zinc was determined in the Crystal Structure of ZMMCM10 in Complex with 16NT Ssdna at 2.8. Angstrom Resolution, PDB code: 7y01:

Zinc binding site 1 out of 1 in the Crystal Structure of ZMMCM10 in Complex with 16NT Ssdna at 2.8. Angstrom Resolution


Mono view


Stereo pair view

A full contact list of Zinc with other atoms in the Zn binding site number 1 of Crystal Structure of ZMMCM10 in Complex with 16NT Ssdna at 2.8. Angstrom Resolution within 5.0Å range: probe atom residue distance (Å) B Occ A:Zn501 b:56.4 occ:1.00 ND1 A:HIS250 2.2 66.4 1.0 CE1 A:HIS250 2.3 65.8 1.0 SG A:CYS225 2.3 72.7 1.0 SG A:CYS235 2.3 51.5 1.0 SG A:CYS247 2.5 58.5 1.0 CB A:CYS235 2.6 47.7 1.0 CB A:CYS225 3.1 48.2 1.0 CG A:HIS250 3.3 65.9 1.0 NE2 A:HIS250 3.3 60.3 1.0 CD2 A:HIS250 3.9 65.3 1.0 CA A:GLY227 4.0 58.6 1.0 O A:GLY227 4.0 61.8 1.0 C A:GLY227 4.0 59.4 1.0 CA A:CYS235 4.1 47.7 1.0 N A:GLY227 4.1 58.4 1.0 CB A:CYS247 4.2 58.0 1.0 CB A:HIS250 4.2 66.3 1.0 CA A:CYS225 4.4 54.7 1.0 N A:CYS247 4.5 59.9 1.0 C A:CYS225 4.6 53.3 1.0 O A:CYS225 4.7 54.1 1.0 N A:LYS228 4.7 61.4 1.0 C A:CYS235 4.8 51.1 1.0 N A:CYS235 4.8 51.6 1.0 CB A:MET237 5.0 48.5 1.0 CA A:CYS247 5.0 59.9 1.0

X.Zhao, J.Wang, D.Jin, J.Cheng, H.Chen, Z.Li, Y.Wang, H.Lou, J.K.Zhu, X.Du, Z.Gong. ATMCM10 Promotes Dna Replication-Coupled Nucleosome Assembly in Arabidopsis. J Integr Plant Biol V. 65 203 2023.
ISSN: ISSN 1744-7909
PubMed: 36541721
DOI: 10.1111/JIPB.13438