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Zinc in PDB 7vx4: ACE2-Rbd in Sars-Cov-2 Beta Variant S-ACE2 Complex

Enzymatic activity of ACE2-Rbd in Sars-Cov-2 Beta Variant S-ACE2 Complex

All present enzymatic activity of ACE2-Rbd in Sars-Cov-2 Beta Variant S-ACE2 Complex:
3.4.17.23;

Zinc Binding Sites:

The binding sites of Zinc atom in the ACE2-Rbd in Sars-Cov-2 Beta Variant S-ACE2 Complex (pdb code 7vx4). This binding sites where shown within 5.0 Angstroms radius around Zinc atom.
In total only one binding site of Zinc was determined in the ACE2-Rbd in Sars-Cov-2 Beta Variant S-ACE2 Complex, PDB code: 7vx4:

Zinc binding site 1 out of 1 in 7vx4

Go back to Zinc Binding Sites List in 7vx4
Zinc binding site 1 out of 1 in the ACE2-Rbd in Sars-Cov-2 Beta Variant S-ACE2 Complex


Mono view


Stereo pair view

A full contact list of Zinc with other atoms in the Zn binding site number 1 of ACE2-Rbd in Sars-Cov-2 Beta Variant S-ACE2 Complex within 5.0Å range:
probe atom residue distance (Å) B Occ
A:Zn901

b:95.2
occ:1.00
OE1 A:GLU402 2.1 61.4 1.0
NE2 A:HIS378 2.2 54.6 1.0
OE2 A:GLU402 2.2 75.0 1.0
NE2 A:HIS374 2.2 63.2 1.0
CD A:GLU402 2.4 64.5 1.0
CE1 A:HIS378 2.9 50.9 1.0
CE1 A:HIS374 2.9 64.7 1.0
CD2 A:HIS374 3.2 53.9 1.0
CD2 A:HIS378 3.3 49.4 1.0
CG A:GLU402 3.8 55.9 1.0
ND1 A:HIS374 4.0 66.8 1.0
ND1 A:HIS378 4.1 56.4 1.0
CG A:HIS374 4.1 56.8 1.0
CG A:HIS378 4.3 52.6 1.0
OE2 A:GLU375 4.4 63.6 1.0
CA A:GLU402 4.5 54.7 1.0
CB A:GLU402 4.5 51.2 1.0
O A:GLU402 4.6 51.1 1.0

Reference:

Y.F.Wang, C.Xu, Y.X.Wang, Q.Hong, Y.Cong. Conformational Dynamics of the Beta and Kappa Sars-Cov-2 Spike Proteins and Their Complexes with ACE2 Receptor Revealed By Cryo-Em To Be Published.
Page generated: Fri Dec 17 11:57:24 2021

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