Zinc in PDB 7um2: Sars-Cov-2 Spike-Derived Peptide S417-425 K417T Mutant (Tiadynykl) Presented By Hla-A*02:01

The structure of Sars-Cov-2 Spike-Derived Peptide S417-425 K417T Mutant (Tiadynykl) Presented By Hla-A*02:01, PDB code: 7um2 was solved by C.Szeto, S.Gras, with X-Ray Crystallography technique. A brief refinement statistics is given in the table below:

Resolution Low / High (Å)	23.81 / 1.63
Space group	P 21 21 21
Cell size a, b, c (Å), α, β, γ (°)	60.171, 79.105, 110.86, 90, 90, 90
R / Rfree (%)	17.9 / 19.5

The structure of Sars-Cov-2 Spike-Derived Peptide S417-425 K417T Mutant (Tiadynykl) Presented By Hla-A*02:01 also contains other interesting chemical elements:

Cadmium	(Cd)	1 atom
Sodium	(Na)	1 atom

The binding sites of Zinc atom in the Sars-Cov-2 Spike-Derived Peptide S417-425 K417T Mutant (Tiadynykl) Presented By Hla-A*02:01 (pdb code 7um2). This binding sites where shown within 5.0 Angstroms radius around Zinc atom.
In total only one binding site of Zinc was determined in the Sars-Cov-2 Spike-Derived Peptide S417-425 K417T Mutant (Tiadynykl) Presented By Hla-A*02:01, PDB code: 7um2:

Zinc binding site 1 out of 1 in the Sars-Cov-2 Spike-Derived Peptide S417-425 K417T Mutant (Tiadynykl) Presented By Hla-A*02:01


Mono view


Stereo pair view

A full contact list of Zinc with other atoms in the Zn binding site number 1 of Sars-Cov-2 Spike-Derived Peptide S417-425 K417T Mutant (Tiadynykl) Presented By Hla-A*02:01 within 5.0Å range: probe atom residue distance (Å) B Occ A:Zn401 b:49.5 occ:1.00 NE2 A:HIS197 2.1 43.4 1.0 CE1 A:HIS197 2.9 43.2 1.0 CD2 A:HIS197 3.2 42.8 1.0 OE2 A:GLU198 3.5 52.3 1.0 CD A:GLU198 4.0 70.8 1.0 ND1 A:HIS197 4.1 43.6 1.0 CG A:HIS197 4.2 40.6 1.0 OE1 A:GLU198 4.3 78.1 1.0 CG A:GLU198 4.9 44.9 1.0

C.Szeto, S.Gras. Sars-Cov-2 Spike-Derived Peptide S417-425 K417T Mutant (Tiadynykl) Presented By Hla-A*02:01 To Be Published.