Zinc in PDB 7r48: Bovine Complex I in the Presence of IM1761092, Deactive Class IV (Composite Map)

Enzymatic activity of Bovine Complex I in the Presence of IM1761092, Deactive Class IV (Composite Map)

All present enzymatic activity of Bovine Complex I in the Presence of IM1761092, Deactive Class IV (Composite Map):
1.6.5.3; 1.6.99.3; 7.1.1.2;

Other elements in 7r48:

The structure of Bovine Complex I in the Presence of IM1761092, Deactive Class IV (Composite Map) also contains other interesting chemical elements:

Chlorine (Cl) 2 atoms
Iron (Fe) 28 atoms
Iodine (I) 2 atoms
Magnesium (Mg) 1 atom
Potassium (K) 1 atom

Zinc Binding Sites:

The binding sites of Zinc atom in the Bovine Complex I in the Presence of IM1761092, Deactive Class IV (Composite Map) (pdb code 7r48). This binding sites where shown within 5.0 Angstroms radius around Zinc atom.
In total only one binding site of Zinc was determined in the Bovine Complex I in the Presence of IM1761092, Deactive Class IV (Composite Map), PDB code: 7r48:

Zinc binding site 1 out of 1 in 7r48

Go back to Zinc Binding Sites List in 7r48
Zinc binding site 1 out of 1 in the Bovine Complex I in the Presence of IM1761092, Deactive Class IV (Composite Map)


Mono view


Stereo pair view

A full contact list of Zinc with other atoms in the Zn binding site number 1 of Bovine Complex I in the Presence of IM1761092, Deactive Class IV (Composite Map) within 5.0Å range:
probe atom residue distance (Å) B Occ
R:Zn201

b:45.2
occ:1.00
NE2 R:HIS68 2.0 25.7 1.0
SG R:CYS84 2.2 30.0 1.0
SG R:CYS87 2.3 29.0 1.0
SG R:CYS59 2.4 30.1 1.0
CE1 R:HIS68 2.9 25.7 1.0
CD2 R:HIS68 3.1 25.7 1.0
CB R:CYS84 3.2 30.0 1.0
CB R:CYS87 3.3 29.0 1.0
CB R:CYS59 3.4 30.1 1.0
N R:GLY61 3.7 29.1 1.0
N R:CYS87 3.7 29.0 1.0
CA R:GLY61 3.8 29.1 1.0
ND1 R:HIS68 4.0 25.7 1.0
CA R:CYS87 4.1 29.0 1.0
CG R:HIS68 4.2 25.7 1.0
C R:CYS59 4.4 30.1 1.0
CB R:TYR86 4.5 25.1 1.0
C R:ASP60 4.5 29.0 1.0
CA R:CYS59 4.6 30.1 1.0
N R:ASP60 4.6 29.0 1.0
CA R:CYS84 4.6 30.0 1.0
O R:CYS59 4.7 30.1 1.0
C R:TYR86 4.8 25.1 1.0
C R:CYS87 4.8 29.0 1.0
N R:GLY88 5.0 30.1 1.0
CA R:ASP60 5.0 29.0 1.0
N R:TYR86 5.0 25.1 1.0
CA R:TYR86 5.0 25.1 1.0
O R:HOH325 5.0 30.9 1.0

Reference:

H.R.Bridges, J.N.Blaza, Z.Yin, I.Chung, M.N.Pollak, J.Hirst. Structural Basis of Mammalian Respiratory Complex I Inhibition By Medicinal Biguanides. Science V. 379 351 2023.
ISSN: ESSN 1095-9203
PubMed: 36701435
DOI: 10.1126/SCIENCE.ADE3332
Page generated: Wed Oct 30 10:08:23 2024

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