Zinc in PDB 7pp2: Complex of Rice Blast (Magnaporthe Oryzae) Effector Protein Avr-Pii with the Host Target EXO70F2 From Rice (Oryza Sativa)

Protein crystallography data

The structure of Complex of Rice Blast (Magnaporthe Oryzae) Effector Protein Avr-Pii with the Host Target EXO70F2 From Rice (Oryza Sativa), PDB code: 7pp2 was solved by J.C.De La Concepcion, A.R.Bentham, D.Lawson, M.J.Banfield, with X-Ray Crystallography technique. A brief refinement statistics is given in the table below:

Resolution Low / High (Å) 66.56 / 2.69
Space group C 1 2 1
Cell size a, b, c (Å), α, β, γ (°) 140.316, 76.621, 67.873, 90, 107.76, 90
R / Rfree (%) 25.2 / 27.9

Zinc Binding Sites:

The binding sites of Zinc atom in the Complex of Rice Blast (Magnaporthe Oryzae) Effector Protein Avr-Pii with the Host Target EXO70F2 From Rice (Oryza Sativa) (pdb code 7pp2). This binding sites where shown within 5.0 Angstroms radius around Zinc atom.
In total only one binding site of Zinc was determined in the Complex of Rice Blast (Magnaporthe Oryzae) Effector Protein Avr-Pii with the Host Target EXO70F2 From Rice (Oryza Sativa), PDB code: 7pp2:

Zinc binding site 1 out of 1 in 7pp2

Go back to Zinc Binding Sites List in 7pp2
Zinc binding site 1 out of 1 in the Complex of Rice Blast (Magnaporthe Oryzae) Effector Protein Avr-Pii with the Host Target EXO70F2 From Rice (Oryza Sativa)


Mono view


Stereo pair view

A full contact list of Zinc with other atoms in the Zn binding site number 1 of Complex of Rice Blast (Magnaporthe Oryzae) Effector Protein Avr-Pii with the Host Target EXO70F2 From Rice (Oryza Sativa) within 5.0Å range:
probe atom residue distance (Å) B Occ
B:Zn101

b:62.0
occ:1.00
SG B:CYS54 2.0 65.2 1.0
NE2 B:HIS67 2.1 64.4 1.0
SG B:CYS51 2.2 65.7 1.0
SG B:CYS69 2.3 65.8 1.0
CE1 B:HIS67 3.1 62.6 1.0
CD2 B:HIS67 3.1 64.5 1.0
CB B:CYS51 3.1 65.4 1.0
CB B:CYS54 3.3 68.6 1.0
CA B:CYS69 3.3 68.2 1.0
CB B:CYS69 3.4 68.0 1.0
N B:CYS54 3.7 69.9 1.0
N B:CYS69 4.0 67.6 1.0
CA B:CYS54 4.0 70.2 1.0
ND1 B:HIS67 4.2 61.6 1.0
CG B:HIS67 4.2 62.8 1.0
C B:CYS54 4.5 70.1 1.0
C B:LYS68 4.6 67.5 1.0
CA B:CYS51 4.6 65.3 1.0
O B:CYS54 4.6 71.0 1.0
C B:CYS69 4.6 71.0 1.0
CB B:LYS53 4.6 71.2 1.0
O B:LYS68 4.6 66.7 1.0
CB B:TYR56 4.7 64.1 1.0
N B:ASN70 4.8 71.7 1.0
C B:LYS53 4.9 72.7 1.0
CD1 A:LEU422 5.0 67.4 1.0

Reference:

J.C.De La Concepcion, K.Fujisaki, A.R.Bentham, N.Cruz-Mireles, V.Sanchez De Medina Hernandez, D.Lawson, S.Kamoun, M.J.Banfield. Crystal Structure of Rice Blast Effector Avr-Pii in Complex with Host EXO70 Defines A New Effector-Target Interface To Be Published.
Page generated: Wed Oct 30 09:16:39 2024

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