Zinc in PDB 7ovs: Heterodimeric Murine Trna-Guanine Transglycosylase in the Presence of Anderson-Evans Type (Tew) and Strandberg Type Polyoxometalate (Pom)

Enzymatic activity of Heterodimeric Murine Trna-Guanine Transglycosylase in the Presence of Anderson-Evans Type (Tew) and Strandberg Type Polyoxometalate (Pom)

All present enzymatic activity of Heterodimeric Murine Trna-Guanine Transglycosylase in the Presence of Anderson-Evans Type (Tew) and Strandberg Type Polyoxometalate (Pom):
2.4.2.29;

Protein crystallography data

The structure of Heterodimeric Murine Trna-Guanine Transglycosylase in the Presence of Anderson-Evans Type (Tew) and Strandberg Type Polyoxometalate (Pom), PDB code: 7ovs was solved by M.Sebastiani, A.Heine, K.Reuter, with X-Ray Crystallography technique. A brief refinement statistics is given in the table below:

Resolution Low / High (Å) 48.56 / 2.60
Space group P 62 2 2
Cell size a, b, c (Å), α, β, γ (°) 199.519, 199.519, 90.278, 90, 90, 120
R / Rfree (%) 21.1 / 24.2

Other elements in 7ovs:

The structure of Heterodimeric Murine Trna-Guanine Transglycosylase in the Presence of Anderson-Evans Type (Tew) and Strandberg Type Polyoxometalate (Pom) also contains other interesting chemical elements:

Tungsten (W) 23 atoms
Tellurium (Te) 3 atoms

Zinc Binding Sites:

The binding sites of Zinc atom in the Heterodimeric Murine Trna-Guanine Transglycosylase in the Presence of Anderson-Evans Type (Tew) and Strandberg Type Polyoxometalate (Pom) (pdb code 7ovs). This binding sites where shown within 5.0 Angstroms radius around Zinc atom.
In total 2 binding sites of Zinc where determined in the Heterodimeric Murine Trna-Guanine Transglycosylase in the Presence of Anderson-Evans Type (Tew) and Strandberg Type Polyoxometalate (Pom), PDB code: 7ovs:
Jump to Zinc binding site number: 1; 2;

Zinc binding site 1 out of 2 in 7ovs

Go back to Zinc Binding Sites List in 7ovs
Zinc binding site 1 out of 2 in the Heterodimeric Murine Trna-Guanine Transglycosylase in the Presence of Anderson-Evans Type (Tew) and Strandberg Type Polyoxometalate (Pom)


Mono view


Stereo pair view

A full contact list of Zinc with other atoms in the Zn binding site number 1 of Heterodimeric Murine Trna-Guanine Transglycosylase in the Presence of Anderson-Evans Type (Tew) and Strandberg Type Polyoxometalate (Pom) within 5.0Å range:
probe atom residue distance (Å) B Occ
A:Zn501

b:58.6
occ:1.00
 ND1 A:HIS382 2.2 57.4 1.0
SG A:CYS356 2.2 58.5 1.0
SG A:CYS351 2.3 59.1 1.0
SG A:CYS353 2.5 57.5 1.0
CE1 A:HIS382 3.1 58.7 1.0
CG A:HIS382 3.1 56.8 1.0
CB A:CYS356 3.2 58.3 1.0
CB A:CYS351 3.3 59.1 1.0
CB A:HIS382 3.4 56.5 1.0
CB A:CYS353 3.5 57.4 1.0
CA A:HIS382 4.0 56.4 1.0
N A:CYS356 4.0 58.5 1.0
CA A:CYS356 4.2 58.7 1.0
NE2 A:HIS382 4.2 58.3 1.0
CD2 A:HIS382 4.2 57.6 1.0
N A:CYS353 4.4 58.1 1.0
CA A:CYS353 4.4 58.0 1.0
CA A:CYS351 4.7 59.5 1.0
O A:HIS382 4.8 57.8 1.0
C A:HIS382 4.8 58.0 1.0
CB A:LEU347 4.9 59.0 1.0
C A:CYS351 4.9 59.5 1.0
C A:CYS353 4.9 57.8 1.0
O A:CYS353 5.0 58.1 1.0

Zinc binding site 2 out of 2 in 7ovs

Go back to Zinc Binding Sites List in 7ovs
Zinc binding site 2 out of 2 in the Heterodimeric Murine Trna-Guanine Transglycosylase in the Presence of Anderson-Evans Type (Tew) and Strandberg Type Polyoxometalate (Pom)


Mono view


Stereo pair view

A full contact list of Zinc with other atoms in the Zn binding site number 2 of Heterodimeric Murine Trna-Guanine Transglycosylase in the Presence of Anderson-Evans Type (Tew) and Strandberg Type Polyoxometalate (Pom) within 5.0Å range:
probe atom residue distance (Å) B Occ
C:Zn501

b:47.2
occ:1.00
 ND1 C:HIS348 2.2 48.2 1.0
SG C:CYS322 2.3 46.1 1.0
SG C:CYS317 2.3 46.2 1.0
SG C:CYS319 2.4 47.0 1.0
CE1 C:HIS348 3.1 47.9 1.0
CG C:HIS348 3.2 48.7 1.0
CB C:CYS317 3.2 46.3 1.0
CB C:CYS322 3.2 46.9 1.0
CB C:CYS319 3.4 47.4 1.0
CB C:HIS348 3.5 49.2 1.0
N C:CYS322 3.9 47.7 1.0
CA C:HIS348 4.0 49.4 1.0
CA C:CYS322 4.2 46.9 1.0
N C:CYS319 4.2 49.1 1.0
NE2 C:HIS348 4.2 48.4 1.0
CA C:CYS319 4.3 48.6 1.0
CD2 C:HIS348 4.3 49.0 1.0
O C:HIS348 4.5 49.2 1.0
CA C:CYS317 4.5 46.8 1.0
C C:CYS317 4.6 47.5 1.0
O C:HOH625 4.7 48.3 1.0
O C:CYS319 4.7 48.0 1.0
C C:HIS348 4.7 49.5 1.0
C C:CYS319 4.7 49.0 1.0
O C:CYS317 4.7 47.3 1.0
CB C:THR321 4.8 48.0 1.0
CB C:ALA351 4.9 49.5 1.0
C C:THR321 4.9 48.0 1.0

Reference:

M.Sebastiani, A.Heine, K.Reuter. Heterodimeric Trna-Guanine Transglycosylase From Mouse To Be Published.
Page generated: Wed Oct 30 08:52:38 2024

Last articles

Zn in 9JPJ
Zn in 9JP7
Zn in 9JPK
Zn in 9JPL
Zn in 9GN6
Zn in 9GN7
Zn in 9GKU
Zn in 9GKW
Zn in 9GKX
Zn in 9GL0
© Copyright 2008-2020 by atomistry.com
Home   |    Site Map   |    Copyright   |    Contact us   |    Privacy