Zinc in PDB 7ogr: Structure of the Apo-State of the Bacteriophage Phikz Non-Virion Rna Polymerase

All present enzymatic activity of Structure of the Apo-State of the Bacteriophage Phikz Non-Virion Rna Polymerase:
2.7.7.6;

The binding sites of Zinc atom in the Structure of the Apo-State of the Bacteriophage Phikz Non-Virion Rna Polymerase (pdb code 7ogr). This binding sites where shown within 5.0 Angstroms radius around Zinc atom.
In total only one binding site of Zinc was determined in the Structure of the Apo-State of the Bacteriophage Phikz Non-Virion Rna Polymerase, PDB code: 7ogr:

Zinc binding site 1 out of 1 in the Structure of the Apo-State of the Bacteriophage Phikz Non-Virion Rna Polymerase


Mono view


Stereo pair view

A full contact list of Zinc with other atoms in the Zn binding site number 1 of Structure of the Apo-State of the Bacteriophage Phikz Non-Virion Rna Polymerase within 5.0Å range: probe atom residue distance (Å) B Occ D:Zn701 b:117.8 occ:1.00 SG D:CYS288 2.3 82.4 1.0 SG D:CYS341 2.3 84.6 1.0 SG D:CYS353 2.3 67.8 1.0 SG D:CYS350 2.4 76.2 1.0 O D:GLY340 3.0 78.3 1.0 CB D:CYS353 3.4 67.8 1.0 CB D:CYS341 3.4 84.6 1.0 CB D:CYS288 3.4 82.4 1.0 CB D:CYS350 3.5 76.2 1.0 CA D:CYS341 3.6 84.6 1.0 N D:CYS350 3.9 76.2 1.0 C D:GLY340 4.0 78.3 1.0 N D:CYS341 4.3 84.6 1.0 CA D:CYS350 4.3 76.2 1.0 NH2 D:ARG336 4.6 73.4 1.0 OG1 D:THR290 4.7 85.1 1.0 CA D:CYS288 4.7 82.4 1.0 CA D:CYS353 4.7 67.8 1.0 N D:CYS288 4.7 82.4 1.0 N D:CYS353 4.8 67.8 1.0 C D:CYS341 4.9 84.6 1.0 C D:ILE349 4.9 76.2 1.0 N D:ASN342 5.0 87.5 1.0

N.Deymartin Garrido, M.Orekhova, Y.T.E.Lai Wan Loong, A.Litvinova, K.Ramlaul, T.Artamonova, A.S.Melnikov, P.Serdobintsev, C.H.S.Aylett, M.Yakunina. Structure of the Bacteriophage Phikz Non-Virion Rna Polymerase. Nucleic Acids Res. 2021.
ISSN: ESSN 1362-4962
PubMed: 34181731
DOI: 10.1093/NAR/GKAB539