Zinc in PDB 7ogr: Structure of the Apo-State of the Bacteriophage Phikz Non-Virion Rna Polymerase

Enzymatic activity of Structure of the Apo-State of the Bacteriophage Phikz Non-Virion Rna Polymerase

All present enzymatic activity of Structure of the Apo-State of the Bacteriophage Phikz Non-Virion Rna Polymerase:
2.7.7.6;

Zinc Binding Sites:

The binding sites of Zinc atom in the Structure of the Apo-State of the Bacteriophage Phikz Non-Virion Rna Polymerase (pdb code 7ogr). This binding sites where shown within 5.0 Angstroms radius around Zinc atom.
In total only one binding site of Zinc was determined in the Structure of the Apo-State of the Bacteriophage Phikz Non-Virion Rna Polymerase, PDB code: 7ogr:

Zinc binding site 1 out of 1 in 7ogr

Go back to Zinc Binding Sites List in 7ogr
Zinc binding site 1 out of 1 in the Structure of the Apo-State of the Bacteriophage Phikz Non-Virion Rna Polymerase


Mono view


Stereo pair view

A full contact list of Zinc with other atoms in the Zn binding site number 1 of Structure of the Apo-State of the Bacteriophage Phikz Non-Virion Rna Polymerase within 5.0Å range:
probe atom residue distance (Å) B Occ
D:Zn701

b:117.8
occ:1.00
SG D:CYS288 2.3 82.4 1.0
SG D:CYS341 2.3 84.6 1.0
SG D:CYS353 2.3 67.8 1.0
SG D:CYS350 2.4 76.2 1.0
O D:GLY340 3.0 78.3 1.0
CB D:CYS353 3.4 67.8 1.0
CB D:CYS341 3.4 84.6 1.0
CB D:CYS288 3.4 82.4 1.0
CB D:CYS350 3.5 76.2 1.0
CA D:CYS341 3.6 84.6 1.0
N D:CYS350 3.9 76.2 1.0
C D:GLY340 4.0 78.3 1.0
N D:CYS341 4.3 84.6 1.0
CA D:CYS350 4.3 76.2 1.0
NH2 D:ARG336 4.6 73.4 1.0
OG1 D:THR290 4.7 85.1 1.0
CA D:CYS288 4.7 82.4 1.0
CA D:CYS353 4.7 67.8 1.0
N D:CYS288 4.7 82.4 1.0
N D:CYS353 4.8 67.8 1.0
C D:CYS341 4.9 84.6 1.0
C D:ILE349 4.9 76.2 1.0
N D:ASN342 5.0 87.5 1.0

Reference:

N.Deymartin Garrido, M.Orekhova, Y.T.E.Lai Wan Loong, A.Litvinova, K.Ramlaul, T.Artamonova, A.S.Melnikov, P.Serdobintsev, C.H.S.Aylett, M.Yakunina. Structure of the Bacteriophage Phikz Non-Virion Rna Polymerase. Nucleic Acids Res. 2021.
ISSN: ESSN 1362-4962
PubMed: 34181731
DOI: 10.1093/NAR/GKAB539
Page generated: Mon Jul 12 17:44:32 2021

Last articles

Zn in 7RRP
Zn in 7OKY
Zn in 7OL0
Zn in 7OKX
Zn in 7ONB
Zn in 7RSF
Zn in 7OUF
Zn in 7OUG
Zn in 7OUH
Zn in 7RGN
© Copyright 2008-2020 by atomistry.com
Home   |    Site Map   |    Copyright   |    Contact us   |    Privacy