Zinc in PDB 7og7: Crystal Structure of the Copper Chaperone Nosl From Shewanella Denitrificans

Protein crystallography data

The structure of Crystal Structure of the Copper Chaperone Nosl From Shewanella Denitrificans, PDB code: 7og7 was solved by B.Prasser, L.Schoener, L.Zhang, O.Einsle, with X-Ray Crystallography technique. A brief refinement statistics is given in the table below:

Resolution Low / High (Å) 44.77 / 1.85
Space group F 41 3 2
Cell size a, b, c (Å), α, β, γ (°) 179.066, 179.066, 179.066, 90, 90, 90
R / Rfree (%) 19.4 / 22.2

Other elements in 7og7:

The structure of Crystal Structure of the Copper Chaperone Nosl From Shewanella Denitrificans also contains other interesting chemical elements:

Copper (Cu) 1 atom

Zinc Binding Sites:

The binding sites of Zinc atom in the Crystal Structure of the Copper Chaperone Nosl From Shewanella Denitrificans (pdb code 7og7). This binding sites where shown within 5.0 Angstroms radius around Zinc atom.
In total only one binding site of Zinc was determined in the Crystal Structure of the Copper Chaperone Nosl From Shewanella Denitrificans, PDB code: 7og7:

Zinc binding site 1 out of 1 in 7og7

Go back to Zinc Binding Sites List in 7og7
Zinc binding site 1 out of 1 in the Crystal Structure of the Copper Chaperone Nosl From Shewanella Denitrificans


Mono view


Stereo pair view

A full contact list of Zinc with other atoms in the Zn binding site number 1 of Crystal Structure of the Copper Chaperone Nosl From Shewanella Denitrificans within 5.0Å range:
probe atom residue distance (Å) B Occ
A:Zn202

b:34.1
occ:1.00
OD2 A:ASP92 1.9 27.4 1.0
SG A:CYS88 2.3 25.6 1.0
SG A:CYS59 2.4 25.7 1.0
SG A:CYS62 2.4 25.8 1.0
CG A:ASP92 2.9 30.3 1.0
CB A:CYS59 3.1 25.8 1.0
CB A:CYS62 3.3 28.7 1.0
CB A:CYS88 3.4 25.6 1.0
CB A:ASP92 3.5 24.0 1.0
CU A:CU1201 3.6 35.8 1.0
N A:CYS62 3.8 28.5 1.0
OD1 A:ASP92 4.0 27.2 1.0
N A:CYS88 4.0 26.7 1.0
CA A:CYS62 4.1 28.2 1.0
CG A:MET145 4.2 33.5 1.0
CA A:CYS88 4.3 24.1 1.0
SD A:MET145 4.4 31.1 1.0
SD A:MET64 4.5 30.2 1.0
CE A:MET145 4.5 33.4 1.0
CG A:MET64 4.5 29.1 1.0
CB A:LEU61 4.6 25.2 1.0
CA A:CYS59 4.6 30.5 1.0
OG A:SER89 4.7 27.7 1.0
C A:CYS62 4.8 32.8 1.0
C A:LEU61 4.9 31.7 1.0
C A:CYS88 5.0 25.4 1.0
CA A:ASP92 5.0 26.7 1.0
N A:GLY63 5.0 28.6 1.0

Reference:

B.Prasser, L.Schoner, L.Zhang, O.Einsle. The Copper Chaperone Nosl Forms A Heterometal Site For Cu Delivery to Nitrous Oxide Reductase. Angew.Chem.Int.Ed.Engl. 2021.
ISSN: ESSN 1521-3773
PubMed: 34171184
DOI: 10.1002/ANIE.202106348
Page generated: Mon Jul 12 17:41:43 2021

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