Zinc in PDB 7ni6: Human Atm Kinase with Bound Atpys

Enzymatic activity of Human Atm Kinase with Bound Atpys

All present enzymatic activity of Human Atm Kinase with Bound Atpys:
2.7.11.1;

Other elements in 7ni6:

The structure of Human Atm Kinase with Bound Atpys also contains other interesting chemical elements:

Magnesium (Mg) 2 atoms

Zinc Binding Sites:

The binding sites of Zinc atom in the Human Atm Kinase with Bound Atpys (pdb code 7ni6). This binding sites where shown within 5.0 Angstroms radius around Zinc atom.
In total 2 binding sites of Zinc where determined in the Human Atm Kinase with Bound Atpys, PDB code: 7ni6:
Jump to Zinc binding site number: 1; 2;

Zinc binding site 1 out of 2 in 7ni6

Go back to Zinc Binding Sites List in 7ni6
Zinc binding site 1 out of 2 in the Human Atm Kinase with Bound Atpys


Mono view


Stereo pair view

A full contact list of Zinc with other atoms in the Zn binding site number 1 of Human Atm Kinase with Bound Atpys within 5.0Å range:
probe atom residue distance (Å) B Occ
A:Zn3201

b:143.7
occ:1.00
ND1 A:HIS1895 2.0 126.4 1.0
NE2 A:HIS1876 2.0 116.3 1.0
SG A:CYS1899 2.3 115.3 1.0
SG A:CYS1900 2.3 112.8 1.0
CG A:HIS1895 2.8 126.4 1.0
CE1 A:HIS1876 2.8 116.3 1.0
CD2 A:HIS1876 2.8 116.3 1.0
CB A:HIS1895 3.0 126.4 1.0
CE1 A:HIS1895 3.1 126.4 1.0
CB A:CYS1900 3.5 112.8 1.0
CB A:CYS1899 3.7 115.3 1.0
ND1 A:HIS1876 3.7 116.3 1.0
CG A:HIS1876 3.8 116.3 1.0
CA A:HIS1895 3.9 126.4 1.0
CD2 A:HIS1895 4.0 126.4 1.0
N A:CYS1900 4.0 112.8 1.0
C A:CYS1899 4.1 115.3 1.0
NE2 A:HIS1895 4.1 126.4 1.0
N A:PHE1896 4.2 119.0 1.0
CA A:CYS1900 4.3 112.8 1.0
O A:CYS1899 4.4 115.3 1.0
CA A:CYS1899 4.5 115.3 1.0
C A:HIS1895 4.6 126.4 1.0

Zinc binding site 2 out of 2 in 7ni6

Go back to Zinc Binding Sites List in 7ni6
Zinc binding site 2 out of 2 in the Human Atm Kinase with Bound Atpys


Mono view


Stereo pair view

A full contact list of Zinc with other atoms in the Zn binding site number 2 of Human Atm Kinase with Bound Atpys within 5.0Å range:
probe atom residue distance (Å) B Occ
B:Zn3201

b:142.7
occ:1.00
ND1 B:HIS1895 2.0 119.2 1.0
NE2 B:HIS1876 2.0 107.8 1.0
SG B:CYS1900 2.3 104.3 1.0
SG B:CYS1899 2.3 106.5 1.0
CE1 B:HIS1876 2.7 107.8 1.0
CG B:HIS1895 2.9 119.2 1.0
CD2 B:HIS1876 3.0 107.8 1.0
CE1 B:HIS1895 3.1 119.2 1.0
CB B:HIS1895 3.1 119.2 1.0
CB B:CYS1899 3.6 106.5 1.0
CB B:CYS1900 3.6 104.3 1.0
ND1 B:HIS1876 3.7 107.8 1.0
CG B:HIS1876 3.9 107.8 1.0
CA B:HIS1895 4.0 119.2 1.0
N B:CYS1900 4.0 104.3 1.0
CD2 B:HIS1895 4.0 119.2 1.0
NE2 B:HIS1895 4.1 119.2 1.0
C B:CYS1899 4.1 106.5 1.0
N B:PHE1896 4.3 111.2 1.0
CA B:CYS1900 4.4 104.3 1.0
CA B:CYS1899 4.5 106.5 1.0
O B:CYS1899 4.5 106.5 1.0
C B:HIS1895 4.6 119.2 1.0

Reference:

K.Stakyte, M.Rotheneder, K.Lammens, J.D.Bartho, U.Graedler, T.Fuchss, U.Pehl, A.Alt, E.Van De Logt, K.P.Hopfner. Molecular Basis of Human Atm Kinase Inhibition To Be Published.
Page generated: Fri Sep 24 17:08:05 2021

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