Zinc in PDB 7ni4: Human Atm Kinase Domain with Bound M4076 Inhibitor

Enzymatic activity of Human Atm Kinase Domain with Bound M4076 Inhibitor

All present enzymatic activity of Human Atm Kinase Domain with Bound M4076 Inhibitor:
2.7.11.1;

Other elements in 7ni4:

The structure of Human Atm Kinase Domain with Bound M4076 Inhibitor also contains other interesting chemical elements:

Fluorine (F) 2 atoms

Zinc Binding Sites:

The binding sites of Zinc atom in the Human Atm Kinase Domain with Bound M4076 Inhibitor (pdb code 7ni4). This binding sites where shown within 5.0 Angstroms radius around Zinc atom.
In total 2 binding sites of Zinc where determined in the Human Atm Kinase Domain with Bound M4076 Inhibitor, PDB code: 7ni4:
Jump to Zinc binding site number: 1; 2;

Zinc binding site 1 out of 2 in 7ni4

Go back to Zinc Binding Sites List in 7ni4
Zinc binding site 1 out of 2 in the Human Atm Kinase Domain with Bound M4076 Inhibitor


Mono view


Stereo pair view

A full contact list of Zinc with other atoms in the Zn binding site number 1 of Human Atm Kinase Domain with Bound M4076 Inhibitor within 5.0Å range:
probe atom residue distance (Å) B Occ
A:Zn3201

b:198.2
occ:1.00
NE2 A:HIS1895 2.0 165.3 1.0
NE2 A:HIS1876 2.0 151.3 1.0
SG A:CYS1899 2.3 155.1 1.0
SG A:CYS1900 2.4 153.9 1.0
CD2 A:HIS1895 2.8 165.3 1.0
CE1 A:HIS1895 3.0 165.3 1.0
CD2 A:HIS1876 3.0 151.3 1.0
CE1 A:HIS1876 3.0 151.3 1.0
CB A:CYS1899 3.3 155.1 1.0
CB A:CYS1900 3.5 153.9 1.0
N A:CYS1900 3.8 153.9 1.0
CG A:HIS1895 3.9 165.3 1.0
ND1 A:HIS1895 4.0 165.3 1.0
ND1 A:HIS1876 4.1 151.3 1.0
CG A:HIS1876 4.1 151.3 1.0
C A:CYS1899 4.1 155.1 1.0
CA A:CYS1900 4.2 153.9 1.0
CD2 A:PHE1896 4.3 157.6 1.0
CA A:CYS1899 4.3 155.1 1.0
O A:CYS1899 4.7 155.1 1.0

Zinc binding site 2 out of 2 in 7ni4

Go back to Zinc Binding Sites List in 7ni4
Zinc binding site 2 out of 2 in the Human Atm Kinase Domain with Bound M4076 Inhibitor


Mono view


Stereo pair view

A full contact list of Zinc with other atoms in the Zn binding site number 2 of Human Atm Kinase Domain with Bound M4076 Inhibitor within 5.0Å range:
probe atom residue distance (Å) B Occ
B:Zn3201

b:206.0
occ:1.00
ND1 B:HIS1895 2.1 177.4 1.0
NE2 B:HIS1876 2.1 158.6 1.0
SG B:CYS1900 2.3 155.7 1.0
SG B:CYS1899 2.3 160.3 1.0
CE1 B:HIS1895 3.0 177.4 1.0
CE1 B:HIS1876 3.0 158.6 1.0
CD2 B:HIS1876 3.0 158.6 1.0
CG B:HIS1895 3.1 177.4 1.0
CB B:CYS1899 3.4 160.3 1.0
CB B:CYS1900 3.4 155.7 1.0
CB B:HIS1895 3.4 177.4 1.0
N B:CYS1900 3.8 155.7 1.0
ND1 B:HIS1876 4.1 158.6 1.0
C B:CYS1899 4.1 160.3 1.0
NE2 B:HIS1895 4.1 177.4 1.0
CG B:HIS1876 4.1 158.6 1.0
CD2 B:HIS1895 4.2 177.4 1.0
CA B:CYS1900 4.2 155.7 1.0
CA B:CYS1899 4.4 160.3 1.0
CA B:HIS1895 4.5 177.4 1.0
N B:PHE1896 4.6 169.2 1.0
O B:CYS1899 4.7 160.3 1.0

Reference:

K.Stakyte, M.Rotheneder, K.Lammens, J.D.Bartho, U.Graedler, T.Fuchss, U.Pehl, A.Alt, E.Van De Logt, K.P.Hopfner. Molecular Basis of Human Atm Kinase Inhibition To Be Published.
Page generated: Fri Sep 24 17:08:06 2021

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