Zinc in PDB 7lre: Cryo-Em of the SLFN12-PDE3A Complex: SLFN12 Body Refinement

Zinc Binding Sites:

The binding sites of Zinc atom in the Cryo-Em of the SLFN12-PDE3A Complex: SLFN12 Body Refinement (pdb code 7lre). This binding sites where shown within 5.0 Angstroms radius around Zinc atom.
In total 2 binding sites of Zinc where determined in the Cryo-Em of the SLFN12-PDE3A Complex: SLFN12 Body Refinement, PDB code: 7lre:
Jump to Zinc binding site number: 1; 2;

Zinc binding site 1 out of 2 in 7lre

Go back to Zinc Binding Sites List in 7lre
Zinc binding site 1 out of 2 in the Cryo-Em of the SLFN12-PDE3A Complex: SLFN12 Body Refinement


Mono view


Stereo pair view

A full contact list of Zinc with other atoms in the Zn binding site number 1 of Cryo-Em of the SLFN12-PDE3A Complex: SLFN12 Body Refinement within 5.0Å range:
probe atom residue distance (Å) B Occ
A:Zn601

b:57.1
occ:1.00
ND1 A:HIS275 2.1 40.5 1.0
SG A:CYS277 2.3 52.3 1.0
SG A:CYS311 2.3 41.1 1.0
SG A:CYS312 2.3 39.9 1.0
CE1 A:HIS275 2.9 40.5 1.0
CG A:HIS275 3.2 40.5 1.0
CB A:CYS312 3.3 39.9 1.0
CB A:CYS311 3.5 41.1 1.0
CB A:CYS277 3.7 52.3 1.0
CB A:HIS275 3.7 40.5 1.0
N A:CYS312 3.9 39.9 1.0
CA A:HIS275 4.0 40.5 1.0
C A:CYS311 4.1 41.1 1.0
NE2 A:HIS275 4.1 40.5 1.0
N A:CYS277 4.1 52.3 1.0
CD2 A:HIS275 4.2 40.5 1.0
CA A:CYS312 4.2 39.9 1.0
N A:PHE276 4.3 42.6 1.0
CA A:CYS311 4.4 41.1 1.0
O A:GLU279 4.4 58.0 1.0
CA A:CYS277 4.5 52.3 1.0
O A:CYS311 4.5 41.1 1.0
C A:HIS275 4.6 40.5 1.0
CE2 A:PHE310 4.7 37.1 1.0

Zinc binding site 2 out of 2 in 7lre

Go back to Zinc Binding Sites List in 7lre
Zinc binding site 2 out of 2 in the Cryo-Em of the SLFN12-PDE3A Complex: SLFN12 Body Refinement


Mono view


Stereo pair view

A full contact list of Zinc with other atoms in the Zn binding site number 2 of Cryo-Em of the SLFN12-PDE3A Complex: SLFN12 Body Refinement within 5.0Å range:
probe atom residue distance (Å) B Occ
B:Zn601

b:57.2
occ:1.00
ND1 B:HIS275 2.1 41.2 1.0
SG B:CYS277 2.3 53.5 1.0
SG B:CYS311 2.3 41.6 1.0
SG B:CYS312 2.3 40.3 1.0
CE1 B:HIS275 2.9 41.2 1.0
CG B:HIS275 3.2 41.2 1.0
CB B:CYS312 3.3 40.3 1.0
CB B:CYS311 3.5 41.6 1.0
CB B:CYS277 3.7 53.5 1.0
CB B:HIS275 3.7 41.2 1.0
N B:CYS312 3.9 40.3 1.0
CA B:HIS275 4.0 41.2 1.0
C B:CYS311 4.1 41.6 1.0
NE2 B:HIS275 4.1 41.2 1.0
N B:CYS277 4.1 53.5 1.0
CD2 B:HIS275 4.2 41.2 1.0
CA B:CYS312 4.2 40.3 1.0
N B:PHE276 4.3 43.1 1.0
CA B:CYS311 4.4 41.6 1.0
O B:GLU279 4.4 59.4 1.0
CA B:CYS277 4.5 53.5 1.0
O B:CYS311 4.5 41.6 1.0
C B:HIS275 4.6 41.2 1.0
CE2 B:PHE310 4.7 37.5 1.0

Reference:

C.W.Garvie, J.R.Fuller, C.W.Garvie, C.T.Lemke. N/A N/A.
Page generated: Mon Jul 12 17:23:30 2021

Last articles

Ca in 6AID
Ca in 6AJ8
Ca in 6AII
Ca in 6A4K
Ca in 5ZZ0
Ca in 6AG0
Ca in 6AGI
Ca in 6A56
Ca in 6ADU
Ca in 6AH4
© Copyright 2008-2020 by atomistry.com
Home   |    Site Map   |    Copyright   |    Contact us   |    Privacy