Zinc in PDB 7kr9: Bifunctional Enzyme Glmu Bound to Zn(II)

Enzymatic activity of Bifunctional Enzyme Glmu Bound to Zn(II)

All present enzymatic activity of Bifunctional Enzyme Glmu Bound to Zn(II):
2.3.1.157; 2.7.7.23;

Protein crystallography data

The structure of Bifunctional Enzyme Glmu Bound to Zn(II), PDB code: 7kr9 was solved by M.J.Maher, with X-Ray Crystallography technique. A brief refinement statistics is given in the table below:

Resolution Low / High (Å) 46.83 / 1.90
Space group H 3 2
Cell size a, b, c (Å), α, β, γ (°) 92.872, 92.872, 280.703, 90, 90, 120
R / Rfree (%) 18.5 / 22.7

Other elements in 7kr9:

The structure of Bifunctional Enzyme Glmu Bound to Zn(II) also contains other interesting chemical elements:

Calcium (Ca) 2 atoms

Zinc Binding Sites:

The binding sites of Zinc atom in the Bifunctional Enzyme Glmu Bound to Zn(II) (pdb code 7kr9). This binding sites where shown within 5.0 Angstroms radius around Zinc atom.
In total only one binding site of Zinc was determined in the Bifunctional Enzyme Glmu Bound to Zn(II), PDB code: 7kr9:

Zinc binding site 1 out of 1 in 7kr9

Go back to Zinc Binding Sites List in 7kr9
Zinc binding site 1 out of 1 in the Bifunctional Enzyme Glmu Bound to Zn(II)


Mono view


Stereo pair view

A full contact list of Zinc with other atoms in the Zn binding site number 1 of Bifunctional Enzyme Glmu Bound to Zn(II) within 5.0Å range:
probe atom residue distance (Å) B Occ
A:Zn1904

b:39.1
occ:1.00
OE1 A:GLU315 1.9 33.5 1.0
NE2 A:HIS330 2.1 24.3 1.0
O A:HOH2250 2.3 23.9 1.0
O A:HOH2235 2.4 23.2 1.0
CD A:GLU315 2.7 35.1 1.0
CE1 A:HIS330 2.9 24.0 1.0
OE2 A:GLU315 3.0 35.4 1.0
CD2 A:HIS330 3.2 25.1 1.0
ND1 A:HIS330 4.1 24.3 1.0
SD A:MET313 4.1 31.1 1.0
CG A:GLU315 4.1 31.3 1.0
CE A:MET313 4.2 32.7 1.0
CG A:HIS330 4.2 24.4 1.0
CG A:MET313 4.5 26.6 1.0
CG A:ARG332 4.5 29.9 1.0
NE A:ARG332 4.7 34.6 1.0
CB A:GLU315 4.8 28.4 1.0

Reference:

E.B.Brazel, S.L.Neville, A.Tan, A.R.Iverson, S.R.Udagedara, M.Sikanyika, D.M.P.De Oliveira, L.Bohlmann, I.M.El-Deeb, K.Ganio, A.G.Mcewan, M.Von Itzstein, M.J.Maher, M.J.Walker, J.W.Rosch, C.A.Mcdevitt. Breaking Streptococcus Pneumoniae Resistance to Ampicillin in A Pneumonia Infection Model To Be Published.
Page generated: Fri Dec 17 11:50:22 2021

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