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Zinc in PDB 7h4o: Group Deposition For Crystallographic Fragment Screening of Coxsackievirus A16 (G-10) 2A Protease -- Crystal Structure of Coxsackievirus A16 (G-10) 2A Protease in Complex with Ncl-00024665 (A71EV2A-X1019)

Enzymatic activity of Group Deposition For Crystallographic Fragment Screening of Coxsackievirus A16 (G-10) 2A Protease -- Crystal Structure of Coxsackievirus A16 (G-10) 2A Protease in Complex with Ncl-00024665 (A71EV2A-X1019)

All present enzymatic activity of Group Deposition For Crystallographic Fragment Screening of Coxsackievirus A16 (G-10) 2A Protease -- Crystal Structure of Coxsackievirus A16 (G-10) 2A Protease in Complex with Ncl-00024665 (A71EV2A-X1019):
3.4.22.29;

Protein crystallography data

The structure of Group Deposition For Crystallographic Fragment Screening of Coxsackievirus A16 (G-10) 2A Protease -- Crystal Structure of Coxsackievirus A16 (G-10) 2A Protease in Complex with Ncl-00024665 (A71EV2A-X1019), PDB code: 7h4o was solved by R.M.Lithgo, M.Fairhead, L.Koekemoer, B.H.Balcomb, E.Capkin, A.V.Chandran, M.Golding, A.S.Godoy, J.C.Aschenbrenner, P.G.Marples, X.Ni, W.Thompson, C.W.E.Tomlinson, C.Wild, M.Winokan, M.-A.E.Xavier, D.Fearon, F.Von Delft, with X-Ray Crystallography technique. A brief refinement statistics is given in the table below:

Resolution Low / High (Å) 46.33 / 2.20
Space group C 1 2 1
Cell size a, b, c (Å), α, β, γ (°) 72.117, 60.498, 32.292, 90, 92.5, 90
R / Rfree (%) 23.5 / 30.1

Other elements in 7h4o:

The structure of Group Deposition For Crystallographic Fragment Screening of Coxsackievirus A16 (G-10) 2A Protease -- Crystal Structure of Coxsackievirus A16 (G-10) 2A Protease in Complex with Ncl-00024665 (A71EV2A-X1019) also contains other interesting chemical elements:

Bromine (Br) 1 atom

Zinc Binding Sites:

The binding sites of Zinc atom in the Group Deposition For Crystallographic Fragment Screening of Coxsackievirus A16 (G-10) 2A Protease -- Crystal Structure of Coxsackievirus A16 (G-10) 2A Protease in Complex with Ncl-00024665 (A71EV2A-X1019) (pdb code 7h4o). This binding sites where shown within 5.0 Angstroms radius around Zinc atom.
In total only one binding site of Zinc was determined in the Group Deposition For Crystallographic Fragment Screening of Coxsackievirus A16 (G-10) 2A Protease -- Crystal Structure of Coxsackievirus A16 (G-10) 2A Protease in Complex with Ncl-00024665 (A71EV2A-X1019), PDB code: 7h4o:

Zinc binding site 1 out of 1 in 7h4o

Go back to Zinc Binding Sites List in 7h4o
Zinc binding site 1 out of 1 in the Group Deposition For Crystallographic Fragment Screening of Coxsackievirus A16 (G-10) 2A Protease -- Crystal Structure of Coxsackievirus A16 (G-10) 2A Protease in Complex with Ncl-00024665 (A71EV2A-X1019)


Mono view


Stereo pair view

A full contact list of Zinc with other atoms in the Zn binding site number 1 of Group Deposition For Crystallographic Fragment Screening of Coxsackievirus A16 (G-10) 2A Protease -- Crystal Structure of Coxsackievirus A16 (G-10) 2A Protease in Complex with Ncl-00024665 (A71EV2A-X1019) within 5.0Å range:
probe atom residue distance (Å) B Occ
A:Zn202

b:30.2
occ:1.00
 ND1 A:HIS118 2.0 32.4 0.5
SG A:CYS116 2.2 28.9 0.5
SG A:CYS56 2.3 25.3 0.5
SG A:CYS58 2.4 27.4 0.5
CG A:HIS118 3.0 31.5 0.5
CB A:CYS58 3.0 26.8 0.5
CE1 A:HIS118 3.1 32.2 0.5
CB A:CYS56 3.1 26.8 0.5
CB A:HIS118 3.2 31.0 0.5
CB A:CYS116 3.3 29.6 0.5
OE1 A:GLN117 3.4 38.2 0.5
N A:HIS118 3.9 31.7 0.5
CD2 A:HIS118 4.1 31.5 0.5
CD A:GLN117 4.2 37.4 0.5
NE2 A:HIS118 4.2 32.0 0.5
CA A:HIS118 4.2 30.9 0.5
CA A:CYS58 4.3 27.3 0.5
CB A:ALA54 4.3 27.7 1.0
N A:CYS58 4.4 27.7 0.5
N A:GLN117 4.5 31.8 0.5
CA A:CYS116 4.6 29.9 0.5
CA A:CYS56 4.6 26.9 0.5
CG A:GLN117 4.7 35.7 0.5
C A:CYS116 4.8 30.3 0.5
NE2 A:GLN117 5.0 37.7 0.5
NH1 A:ARG138 5.0 22.3 1.0
C A:GLN117 5.0 32.5 0.5

Reference:

R.M.Lithgo, M.Fairhead, L.Koekemoer, B.H.Balcomb, E.Capkin, A.V.Chandran, M.Golding, A.S.Godoy, J.C.Aschenbrenner, P.G.Marples, X.Ni, W.Thompson, C.W.E.Tomlinson, C.Wild, M.Winokan, M.-A.E.Xavier, D.Fearon, F.Von Delft. Group Deposition For Crystallographic Fragment Screening of Coxsackievirus A16 (G-10) 2A Protease To Be Published.
Page generated: Tue Oct 29 20:50:23 2024

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