Zinc in PDB 7d4q: Structure of Human TRPC5 in Complex with Hc-070
Other elements in 7d4q:
The structure of Structure of Human TRPC5 in Complex with Hc-070 also contains other interesting chemical elements:
Zinc Binding Sites:
The binding sites of Zinc atom in the Structure of Human TRPC5 in Complex with Hc-070
(pdb code 7d4q). This binding sites where shown within
5.0 Angstroms radius around Zinc atom.
In total 4 binding sites of Zinc where determined in the
Structure of Human TRPC5 in Complex with Hc-070, PDB code: 7d4q:
Jump to Zinc binding site number:
1;
2;
3;
4;
Zinc binding site 1 out
of 4 in 7d4q
Go back to
Zinc Binding Sites List in 7d4q
Zinc binding site 1 out
of 4 in the Structure of Human TRPC5 in Complex with Hc-070
Mono view
Stereo pair view
|
A full contact list of Zinc with other atoms in the Zn binding
site number 1 of Structure of Human TRPC5 in Complex with Hc-070 within 5.0Å range:
probe
|
atom
|
residue
|
distance (Å)
|
B
|
Occ
|
A:Zn804
b:208.6
occ:1.00
|
ND1
|
A:HIS172
|
2.1
|
166.3
|
1.0
|
SG
|
A:CYS178
|
2.3
|
177.6
|
1.0
|
SG
|
A:CYS181
|
2.3
|
186.6
|
1.0
|
SG
|
A:CYS176
|
2.3
|
159.7
|
1.0
|
CE1
|
A:HIS172
|
3.0
|
158.7
|
1.0
|
CG
|
A:HIS172
|
3.1
|
153.3
|
1.0
|
CB
|
A:CYS181
|
3.3
|
166.4
|
1.0
|
CB
|
A:CYS178
|
3.4
|
173.9
|
1.0
|
CB
|
A:HIS172
|
3.4
|
147.7
|
1.0
|
CB
|
A:CYS176
|
3.6
|
158.4
|
1.0
|
N
|
A:CYS178
|
4.1
|
160.7
|
1.0
|
N
|
A:CYS181
|
4.1
|
167.7
|
1.0
|
NE2
|
A:HIS172
|
4.1
|
152.6
|
1.0
|
CD2
|
A:HIS172
|
4.2
|
151.4
|
1.0
|
CA
|
A:CYS178
|
4.3
|
166.6
|
1.0
|
CA
|
A:CYS181
|
4.3
|
162.0
|
1.0
|
C
|
A:CYS178
|
4.8
|
165.6
|
1.0
|
CA
|
A:CYS176
|
4.8
|
160.7
|
1.0
|
C
|
A:CYS176
|
4.8
|
166.7
|
1.0
|
O
|
A:CYS178
|
4.8
|
164.8
|
1.0
|
CA
|
A:HIS172
|
4.9
|
143.2
|
1.0
|
N
|
A:ASN177
|
5.0
|
168.1
|
1.0
|
|
Zinc binding site 2 out
of 4 in 7d4q
Go back to
Zinc Binding Sites List in 7d4q
Zinc binding site 2 out
of 4 in the Structure of Human TRPC5 in Complex with Hc-070
Mono view
Stereo pair view
|
A full contact list of Zinc with other atoms in the Zn binding
site number 2 of Structure of Human TRPC5 in Complex with Hc-070 within 5.0Å range:
probe
|
atom
|
residue
|
distance (Å)
|
B
|
Occ
|
B:Zn804
b:208.6
occ:1.00
|
ND1
|
B:HIS172
|
2.1
|
166.3
|
1.0
|
SG
|
B:CYS178
|
2.3
|
177.6
|
1.0
|
SG
|
B:CYS181
|
2.3
|
186.6
|
1.0
|
SG
|
B:CYS176
|
2.3
|
159.7
|
1.0
|
CE1
|
B:HIS172
|
3.0
|
158.7
|
1.0
|
CG
|
B:HIS172
|
3.1
|
153.3
|
1.0
|
CB
|
B:CYS181
|
3.3
|
166.4
|
1.0
|
CB
|
B:CYS178
|
3.4
|
173.9
|
1.0
|
CB
|
B:HIS172
|
3.4
|
147.7
|
1.0
|
CB
|
B:CYS176
|
3.6
|
158.4
|
1.0
|
N
|
B:CYS178
|
4.1
|
160.7
|
1.0
|
N
|
B:CYS181
|
4.1
|
167.7
|
1.0
|
NE2
|
B:HIS172
|
4.1
|
152.6
|
1.0
|
CD2
|
B:HIS172
|
4.2
|
151.4
|
1.0
|
CA
|
B:CYS178
|
4.3
|
166.6
|
1.0
|
CA
|
B:CYS181
|
4.3
|
162.0
|
1.0
|
C
|
B:CYS178
|
4.8
|
165.6
|
1.0
|
CA
|
B:CYS176
|
4.8
|
160.7
|
1.0
|
C
|
B:CYS176
|
4.8
|
166.7
|
1.0
|
O
|
B:CYS178
|
4.8
|
164.8
|
1.0
|
CA
|
B:HIS172
|
4.9
|
143.2
|
1.0
|
N
|
B:ASN177
|
5.0
|
168.1
|
1.0
|
|
Zinc binding site 3 out
of 4 in 7d4q
Go back to
Zinc Binding Sites List in 7d4q
Zinc binding site 3 out
of 4 in the Structure of Human TRPC5 in Complex with Hc-070
Mono view
Stereo pair view
|
A full contact list of Zinc with other atoms in the Zn binding
site number 3 of Structure of Human TRPC5 in Complex with Hc-070 within 5.0Å range:
probe
|
atom
|
residue
|
distance (Å)
|
B
|
Occ
|
C:Zn804
b:208.6
occ:1.00
|
ND1
|
C:HIS172
|
2.1
|
166.3
|
1.0
|
SG
|
C:CYS178
|
2.3
|
177.6
|
1.0
|
SG
|
C:CYS181
|
2.3
|
186.6
|
1.0
|
SG
|
C:CYS176
|
2.3
|
159.7
|
1.0
|
CE1
|
C:HIS172
|
3.0
|
158.7
|
1.0
|
CG
|
C:HIS172
|
3.1
|
153.3
|
1.0
|
CB
|
C:CYS181
|
3.3
|
166.4
|
1.0
|
CB
|
C:CYS178
|
3.4
|
173.9
|
1.0
|
CB
|
C:HIS172
|
3.4
|
147.7
|
1.0
|
CB
|
C:CYS176
|
3.6
|
158.4
|
1.0
|
N
|
C:CYS178
|
4.1
|
160.7
|
1.0
|
N
|
C:CYS181
|
4.1
|
167.7
|
1.0
|
NE2
|
C:HIS172
|
4.1
|
152.6
|
1.0
|
CD2
|
C:HIS172
|
4.2
|
151.4
|
1.0
|
CA
|
C:CYS178
|
4.3
|
166.6
|
1.0
|
CA
|
C:CYS181
|
4.3
|
162.0
|
1.0
|
C
|
C:CYS178
|
4.8
|
165.6
|
1.0
|
CA
|
C:CYS176
|
4.8
|
160.7
|
1.0
|
C
|
C:CYS176
|
4.8
|
166.7
|
1.0
|
O
|
C:CYS178
|
4.8
|
164.8
|
1.0
|
CA
|
C:HIS172
|
4.9
|
143.2
|
1.0
|
N
|
C:ASN177
|
5.0
|
168.1
|
1.0
|
|
Zinc binding site 4 out
of 4 in 7d4q
Go back to
Zinc Binding Sites List in 7d4q
Zinc binding site 4 out
of 4 in the Structure of Human TRPC5 in Complex with Hc-070
Mono view
Stereo pair view
|
A full contact list of Zinc with other atoms in the Zn binding
site number 4 of Structure of Human TRPC5 in Complex with Hc-070 within 5.0Å range:
probe
|
atom
|
residue
|
distance (Å)
|
B
|
Occ
|
D:Zn804
b:208.6
occ:1.00
|
ND1
|
D:HIS172
|
2.1
|
166.3
|
1.0
|
SG
|
D:CYS178
|
2.3
|
177.6
|
1.0
|
SG
|
D:CYS181
|
2.3
|
186.6
|
1.0
|
SG
|
D:CYS176
|
2.3
|
159.7
|
1.0
|
CE1
|
D:HIS172
|
3.0
|
158.7
|
1.0
|
CG
|
D:HIS172
|
3.1
|
153.3
|
1.0
|
CB
|
D:CYS181
|
3.3
|
166.4
|
1.0
|
CB
|
D:CYS178
|
3.4
|
173.9
|
1.0
|
CB
|
D:HIS172
|
3.4
|
147.7
|
1.0
|
CB
|
D:CYS176
|
3.6
|
158.4
|
1.0
|
N
|
D:CYS178
|
4.1
|
160.7
|
1.0
|
N
|
D:CYS181
|
4.1
|
167.7
|
1.0
|
NE2
|
D:HIS172
|
4.1
|
152.6
|
1.0
|
CD2
|
D:HIS172
|
4.2
|
151.4
|
1.0
|
CA
|
D:CYS178
|
4.3
|
166.6
|
1.0
|
CA
|
D:CYS181
|
4.3
|
162.0
|
1.0
|
C
|
D:CYS178
|
4.8
|
165.6
|
1.0
|
CA
|
D:CYS176
|
4.8
|
160.7
|
1.0
|
C
|
D:CYS176
|
4.8
|
166.7
|
1.0
|
O
|
D:CYS178
|
4.9
|
164.8
|
1.0
|
CA
|
D:HIS172
|
4.9
|
143.2
|
1.0
|
N
|
D:ASN177
|
5.0
|
168.1
|
1.0
|
|
Reference:
L.Chen,
K.Song,
M.Wei,
W.Guo.
Structure of Human TRPC5 in Complex with Hc-070 To Be Published.
Page generated: Tue Oct 29 18:40:20 2024
|