Zinc in PDB 6ymy: Cytochrome C Oxidase From Saccharomyces Cerevisiae

Enzymatic activity of Cytochrome C Oxidase From Saccharomyces Cerevisiae

All present enzymatic activity of Cytochrome C Oxidase From Saccharomyces Cerevisiae:
1.9.3.1;

Other elements in 6ymy:

The structure of Cytochrome C Oxidase From Saccharomyces Cerevisiae also contains other interesting chemical elements:

Iron (Fe) 2 atoms
Copper (Cu) 3 atoms

Zinc Binding Sites:

The binding sites of Zinc atom in the Cytochrome C Oxidase From Saccharomyces Cerevisiae (pdb code 6ymy). This binding sites where shown within 5.0 Angstroms radius around Zinc atom.
In total only one binding site of Zinc was determined in the Cytochrome C Oxidase From Saccharomyces Cerevisiae, PDB code: 6ymy:

Zinc binding site 1 out of 1 in 6ymy

Go back to Zinc Binding Sites List in 6ymy
Zinc binding site 1 out of 1 in the Cytochrome C Oxidase From Saccharomyces Cerevisiae


Mono view


Stereo pair view

A full contact list of Zinc with other atoms in the Zn binding site number 1 of Cytochrome C Oxidase From Saccharomyces Cerevisiae within 5.0Å range:
probe atom residue distance (Å) B Occ
d:Zn201

b:0.9
occ:1.00
CB d:CYS137 2.5 0.8 1.0
O d:CYS111 2.7 0.1 1.0
NE2 d:HIS119 2.8 0.9 1.0
SG d:CYS134 2.9 0.5 1.0
CE1 d:HIS119 3.1 0.9 1.0
SG d:CYS111 3.4 0.1 1.0
CB d:CYS134 3.6 0.5 1.0
N d:CYS137 3.6 0.8 1.0
CA d:CYS137 3.6 0.8 1.0
CB d:CYS111 3.7 0.1 1.0
SG d:CYS137 3.8 0.8 1.0
C d:CYS111 3.9 0.1 1.0
CD2 d:HIS119 4.0 0.9 1.0
ND1 d:HIS119 4.4 0.9 1.0
N d:GLY138 4.4 98.4 1.0
OG d:SER139 4.4 97.3 1.0
CA d:CYS111 4.4 0.1 1.0
C d:CYS137 4.5 0.8 1.0
CA d:CYS134 4.6 0.5 1.0
N d:GLY113 4.7 0.5 1.0
CG d:HIS119 4.8 0.9 1.0
C d:GLU136 4.9 99.0 1.0
O d:CYS134 4.9 0.5 1.0
N d:SER139 5.0 97.3 1.0
N d:THR112 5.0 0.2 1.0

Reference:

J.Berndtsson, A.Aufschnaiter, S.Rathore, L.Marin-Buera, H.Dawitz, J.Diessl, V.Kohler, A.Barrientos, S.Buttner, F.Fontanesi, M.Ott. Mitochondrial Respiratory Supercomplex Formation Improves Bioenergetics and Confers A Selectable Fitness Advantage To Be Published.
Page generated: Wed Dec 16 13:18:07 2020

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