Zinc in PDB 6r04: T. Cruzi Fpps

Protein crystallography data

The structure of T. Cruzi Fpps, PDB code: 6r04 was solved by J.K.Petrick, L.Muenzker, C.Schleberger, W.Jahnke, with X-Ray Crystallography technique. A brief refinement statistics is given in the table below:

Resolution Low / High (Å) 49.93 / 1.47
Space group P 61 2 2
Cell size a, b, c (Å), α, β, γ (°) 57.650, 57.650, 397.590, 90.00, 90.00, 120.00
R / Rfree (%) 18.7 / 21.2

Zinc Binding Sites:

The binding sites of Zinc atom in the T. Cruzi Fpps (pdb code 6r04). This binding sites where shown within 5.0 Angstroms radius around Zinc atom.
In total 2 binding sites of Zinc where determined in the T. Cruzi Fpps, PDB code: 6r04:
Jump to Zinc binding site number: 1; 2;

Zinc binding site 1 out of 2 in 6r04

Go back to Zinc Binding Sites List in 6r04
Zinc binding site 1 out of 2 in the T. Cruzi Fpps


Mono view


Stereo pair view

A full contact list of Zinc with other atoms in the Zn binding site number 1 of T. Cruzi Fpps within 5.0Å range:
probe atom residue distance (Å) B Occ
A:Zn401

b:30.2
occ:0.25
O A:HOH501 2.0 41.4 1.0
O A:HOH611 2.2 48.2 1.0
OD2 A:ASP250 2.2 68.2 1.0
O A:HOH600 2.3 56.4 1.0
CG A:ASP250 3.4 61.5 1.0
O A:HOH532 3.4 54.8 1.0
OD1 A:ASP254 3.6 49.8 1.0
OD1 A:ASP250 3.9 64.8 1.0
OD2 A:ASP268 4.1 44.7 1.0
CB A:ASP254 4.1 45.1 1.0
CG A:ASP254 4.2 49.1 1.0
O A:ASP250 4.3 41.7 1.0
OD1 A:ASP268 4.3 37.9 1.0
O A:HOH699 4.4 60.7 1.0
NE2 A:GLN247 4.4 33.7 1.0
CB A:ASP250 4.6 41.9 1.0
C A:ASP250 4.6 41.1 1.0
OD1 A:ASP251 4.6 35.3 1.0
CG A:ASP268 4.6 39.9 1.0
N A:ASP251 5.0 35.3 1.0

Zinc binding site 2 out of 2 in 6r04

Go back to Zinc Binding Sites List in 6r04
Zinc binding site 2 out of 2 in the T. Cruzi Fpps


Mono view


Stereo pair view

A full contact list of Zinc with other atoms in the Zn binding site number 2 of T. Cruzi Fpps within 5.0Å range:
probe atom residue distance (Å) B Occ
A:Zn402

b:34.2
occ:0.27
O A:HOH510 1.9 43.6 1.0
OD2 A:ASP102 2.3 53.8 1.0
O A:HOH624 2.7 56.7 1.0
CG A:ASP102 3.1 44.0 1.0
OD1 A:ASP102 3.1 43.3 1.0
OE1 A:GLN167 3.7 37.8 1.0
NE2 A:GLN167 3.9 34.8 1.0
O A:HOH699 3.9 60.7 1.0
OD2 A:ASP170 4.1 44.6 1.0
CB A:ASP98 4.1 25.0 1.0
CD A:GLN167 4.3 41.0 1.0
O A:HOH586 4.3 38.6 1.0
CG A:ASP98 4.4 30.7 1.0
CB A:ASP102 4.5 29.8 1.0
NZ A:LYS273 4.5 65.8 1.0
CG1 A:VAL171 4.6 33.2 1.0
OD2 A:ASP98 4.6 34.3 1.0
O A:ASP98 4.7 25.7 1.0
CA A:ASP98 4.9 22.7 1.0
O A:HOH725 5.0 54.0 1.0

Reference:

J.K.Petrick, W.Jahnke. T. Cruzi Fpps To Be Published.
Page generated: Wed Dec 16 12:35:01 2020

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