Zinc in PDB 6agb: Cryo-Em Structure of Yeast Ribonuclease P

All present enzymatic activity of Cryo-Em Structure of Yeast Ribonuclease P:
3.1.26.5;

The binding sites of Zinc atom in the Cryo-Em Structure of Yeast Ribonuclease P (pdb code 6agb). This binding sites where shown within 5.0 Angstroms radius around Zinc atom.
In total only one binding site of Zinc was determined in the Cryo-Em Structure of Yeast Ribonuclease P, PDB code: 6agb:

Zinc binding site 1 out of 1 in the Cryo-Em Structure of Yeast Ribonuclease P


Mono view


Stereo pair view

A full contact list of Zinc with other atoms in the Zn binding site number 1 of Cryo-Em Structure of Yeast Ribonuclease P within 5.0Å range: probe atom residue distance (Å) B Occ K:Zn201 b:78.7 occ:1.00 SG K:CYS115 2.8 93.8 1.0 SG K:CYS90 2.9 75.5 1.0 SG K:CYS117 2.9 94.5 1.0 CB K:CYS115 3.4 93.8 1.0 SG K:CYS93 3.5 70.1 1.0 CB K:CYS90 3.5 75.5 1.0 CG K:ARG95 3.8 78.9 1.0 CD K:ARG95 3.9 78.9 1.0 O K:THR119 4.0 90.8 1.0 NE K:ARG95 4.0 78.9 1.0 CB K:THR119 4.3 90.8 1.0 CD2 K:LEU97 4.3 76.4 1.0 CB K:CYS117 4.5 94.5 1.0 CZ K:ARG95 4.7 78.9 1.0 C K:THR119 4.8 90.8 1.0 N K:THR119 4.9 90.8 1.0 CA K:CYS90 4.9 75.5 1.0 CA K:CYS115 4.9 93.8 1.0 CA K:THR119 4.9 90.8 1.0 N K:CYS117 4.9 94.5 1.0

P.Lan, M.Tan, Y.Zhang, S.Niu, J.Chen, S.Shi, S.Qiu, X.Wang, X.Peng, G.Cai, H.Cheng, J.Wu, G.Li, M.Lei. Structural Insight Into Precursor Trna Processing By Yeast Ribonuclease P. Science V. 362 2018.
ISSN: ESSN 1095-9203
PubMed: 30262633
DOI: 10.1126/SCIENCE.AAT6678