Atomistry » Zinc » PDB 6a83-6alh » 6agb
Atomistry »
  Zinc »
    PDB 6a83-6alh »
      6agb »

Zinc in PDB 6agb: Cryo-Em Structure of Yeast Ribonuclease P

Enzymatic activity of Cryo-Em Structure of Yeast Ribonuclease P

All present enzymatic activity of Cryo-Em Structure of Yeast Ribonuclease P:
3.1.26.5;

Zinc Binding Sites:

The binding sites of Zinc atom in the Cryo-Em Structure of Yeast Ribonuclease P (pdb code 6agb). This binding sites where shown within 5.0 Angstroms radius around Zinc atom.
In total only one binding site of Zinc was determined in the Cryo-Em Structure of Yeast Ribonuclease P, PDB code: 6agb:

Zinc binding site 1 out of 1 in 6agb

Go back to Zinc Binding Sites List in 6agb
Zinc binding site 1 out of 1 in the Cryo-Em Structure of Yeast Ribonuclease P


Mono view


Stereo pair view

A full contact list of Zinc with other atoms in the Zn binding site number 1 of Cryo-Em Structure of Yeast Ribonuclease P within 5.0Å range:
probe atom residue distance (Å) B Occ
K:Zn201

b:78.7
occ:1.00
SG K:CYS115 2.8 93.8 1.0
SG K:CYS90 2.9 75.5 1.0
SG K:CYS117 2.9 94.5 1.0
CB K:CYS115 3.4 93.8 1.0
SG K:CYS93 3.5 70.1 1.0
CB K:CYS90 3.5 75.5 1.0
CG K:ARG95 3.8 78.9 1.0
CD K:ARG95 3.9 78.9 1.0
O K:THR119 4.0 90.8 1.0
NE K:ARG95 4.0 78.9 1.0
CB K:THR119 4.3 90.8 1.0
CD2 K:LEU97 4.3 76.4 1.0
CB K:CYS117 4.5 94.5 1.0
CZ K:ARG95 4.7 78.9 1.0
C K:THR119 4.8 90.8 1.0
N K:THR119 4.9 90.8 1.0
CA K:CYS90 4.9 75.5 1.0
CA K:CYS115 4.9 93.8 1.0
CA K:THR119 4.9 90.8 1.0
N K:CYS117 4.9 94.5 1.0

Reference:

P.Lan, M.Tan, Y.Zhang, S.Niu, J.Chen, S.Shi, S.Qiu, X.Wang, X.Peng, G.Cai, H.Cheng, J.Wu, G.Li, M.Lei. Structural Insight Into Precursor Trna Processing By Yeast Ribonuclease P. Science V. 362 2018.
ISSN: ESSN 1095-9203
PubMed: 30262633
DOI: 10.1126/SCIENCE.AAT6678
Page generated: Wed Dec 16 11:29:39 2020

Last articles

Zn in 7VD8
Zn in 7V1R
Zn in 7V1Q
Zn in 7VPF
Zn in 7T85
Zn in 7T5F
Zn in 7NF9
Zn in 7M4M
Zn in 7M4O
Zn in 7M4N
© Copyright 2008-2020 by atomistry.com
Home   |    Site Map   |    Copyright   |    Contact us   |    Privacy