Chemical elements
  Zinc
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    Physical Properties
    Chemical Properties
    PDB 12ca-1ai0
    PDB 1aiy-1b6z
    PDB 1b71-1bs8
    PDB 1bsk-1cao
    PDB 1caq-1ctt
    PDB 1ctu-1de6
    PDB 1def-1dy0
    PDB 1dy1-1ed6
    PDB 1ed8-1exk
    PDB 1eyf-1fj9
    PDB 1fjg-1g0e
    PDB 1g0f-1gkq
    PDB 1gkr-1ha5
    PDB 1hbm-1hso
    PDB 1hsz-1i6v
    PDB 1i73-1im5
    PDB 1iml-1jcv
    PDB 1jcz-1jy8
    PDB 1jyb-1kh4
    PDB 1kh5-1kys
    PDB 1kzo-1llm
    PDB 1llu-1m7j
    PDB 1m9j-1mwo
    PDB 1mwq-1ndv
    PDB 1ndw-1nyq
    PDB 1nyr-1os4
    PDB 1os9-1p9w
    PDB 1paa-1pud
    PDB 1pv8-1q9l
    PDB 1q9m-1qv6
    PDB 1qv7-1r6o
    PDB 1r79-1ro9
    PDB 1ror-1sfo
    PDB 1sg0-1t3k
    PDB 1t4k-1tkh
    PDB 1tkj-1u0l
    PDB 1u10-1ums
    PDB 1umt-1v67
    PDB 1v6g-1vrq
    PDB 1vs0-1wew
    PDB 1wfe-1wwf
    PDB 1wwg-1xb1
    PDB 1xb8-1xpz
    PDB 1xq0-1y5w
    PDB 1y5x-1ylk
    PDB 1ylo-1z8r
    PDB 1z93-1zkx
    PDB 1zl6-258l
    PDB 2a03-2afo
    PDB 2afs-2atq
    PDB 2au3-2bfz
    PDB 2bg2-2c3a
    PDB 2c4r-2cij
    PDB 2cim-2czr
    PDB 2d0w-2djw
    PDB 2dkc-2e1b
    PDB 2e1s-2eer
    PDB 2eex-2em4
    PDB 2em5-2eoj
    PDB 2eok-2erq
    PDB 2esf-2fa7
    PDB 2fac-2fpx
    PDB 2fqp-2g84
    PDB 2g87-2gvf
    PDB 2gvi-2han
    PDB 2hap-2huc
    PDB 2hue-2imc
    PDB 2imr-2j65
    PDB 2j6a-2jq5
    PDB 2jr7-2kfn
    PDB 2kft-2l75
    PDB 2lgv-2nx9
    PDB 2nxa-2oc8
    PDB 2occ-2osm
    PDB 2oso-2p53
    PDB 2p57-2pow
    PDB 2ppb-2q8j
    PDB 2qa1-2qp6
    PDB 2qpj-2r71
    PDB 2r74-2sod
    PDB 2srt-2v86
    PDB 2v87-2vp7
    PDB 2vpb-2vyo
    PDB 2vz5-2wey
    PDB 2wfq-2wx0
    PDB 2wx1-2xam
    PDB 2xan-2xr9
    PDB 2xrg-2ytd
    PDB 2yte-2z30
    PDB 2z3g-2zet
    PDB 2zh0-3a32
    PDB 3a36-3aoi
    PDB 3at1-3bk1
    PDB 3bk2-3byr
    PDB 3byw-3cia
    PDB 3ciz-3d08
    PDB 3d09-3dbu
    PDB 3dc3-3dp6
    PDB 3dpe-3e1w
    PDB 3e1z-3ebh
    PDB 3ebi-3epk
    PDB 3epl-3f28
    PDB 3f2b-3fhe
    PDB 3fhp-3ful
    PDB 3fum-3g9y
    PDB 3ga3-3gpu
    PDB 3gpx-3h2w
    PDB 3h3e-3hfy
    PDB 3hgz-3hsn
    PDB 3hso-3i8v
    PDB 3i9b-3ij6
    PDB 3ijf-3ixe
    PDB 3iz0-3k34
    PDB 3k35-3kiy
    PDB 3kj1-3kvt
    PDB 3kwa-3lat
    PDB 3lcn-3lrr
    PDB 3ls1-3m1n
    PDB 3m1v-3mek
    PDB 3men-3mru
    PDB 3ms0-3n63
    PDB 3n64-3nin
      3n64
      3n65
      3n66
      3n67
      3n68
      3n69
      3n6a
      3n6b
      3n6c
      3n6d
      3n6e
      3n6f
      3n6g
      3n6w
      3n71
      3n9l
      3n9m
      3n9n
      3n9o
      3n9p
      3n9q
      3n9r
      3n9s
      3na7
      3na9
      3naa
      3nab
      3nac
      3nat
      3ncj
      3ncu
      3ndi
      3ndj
      3ne8
      3neh
      3nf3
      3nfz
      3ng2
      3ngj
      3nh4
      3nh5
      3nh8
      3nhe
      3nih
      3nii
      3nij
      3nik
      3nil
      3nim
      3nin
    PDB 3nis-3ny2
    PDB 3ny3-3ohc
    PDB 3ohd-3oyl
    PDB 3oym-3pih
    PDB 3pki-3r0d
    PDB 3rj7-3t74
    PDB 3t87-3u9g
    PDB 3ua7-3v24
    PDB 3v25-4agl
    PDB 4agm-4dih
    PDB 4dii-4efs
    PDB 4eg2-4fc8
    PDB 4fgm-6tli
    PDB 6tmn-9nse

Zinc in PDB, part 122 (6051-6100), PDB files 3n64 - 3nin






Experimental structures of coordination spheres of Zinc (Zn) in bioorganic molecules from X-Ray and NMR experiments. Coordination spheres were calculated with 5.0 Angstroms radius around Zinc atoms.
PDB files 6051-6100 (3n64 - 3nin):
  1. 3n64 - Structure of Neuronal Nitric Oxide Synthase D597N Mutant Heme Domain in Complex With 6,6'-(2,2'-(5-Amino-1,3-Phenylene)Bis(Ethane-2,1- Diyl))Bis(4-Methylpyridin-2-Amine)
  2. 3n65 - Structure of Neuronal Nitric Oxide Synthase S602H Mutant Heme Domain in Complex With 6,6'-(2,2'-(Pyridine-3,5-Diyl)Bis(Ethane-2,1-Diyl)) Bis(4-Methylpyridin-2-Amine)
  3. 3n66 - Structure of Neuronal Nitric Oxide Synthase S602H Mutant Heme Domain in Complex With 6,6'-(2,2'-(5-Amino-1,3-Phenylene)Bis(Ethane-2,1- Diyl))Bis(4-Methylpyridin-2-Amine)
  4. 3n67 - Structure of Endothelial Nitric Oxide Synthase N368D/V106M Double Mutant Heme Domain Complexed With 6,6'-(2,2'-(5-Amino-1,3-Phenylene) Bis(Ethane-2,1-Diyl))Bis(4-Methylpyridin-2-Amine)
  5. 3n68 - Structure of Endothelial Nitric Oxide Synthase Heme Domain N368D/V106M Double Mutant Complexed With 4-(3-(2-(6-Amino-4-Methylpyridin-2-Yl) Ethyl)Phenethyl)-6-Methylpyridin-2-Amine
  6. 3n69 - Structure of Endothelial Nitric Oxide Synthase N368D/V106M Double Mutant Heme Domain Complexed With 6,6'-(2,2'-(Pyridine-3,5-Diyl) Bis(Ethane-2,1-Diyl))Bis(4-Methylpyridin-2-Amine)
  7. 3n6a - Structure of Endothelial Nitric Oxide Synthase N368D/V106M Double Mutant Heme Domain Complexed With 4-(2-(5-(2-(6-Amino-4- Methylpyridin-2-Yl)Ethyl)Pyridin-3-Yl)Ethyl)-6-Methylpyridin-2-Amine
  8. 3n6b - Structure of Endothelial Nitric Oxide Synthase H373S Single Mutant Heme Domain Complexed With 6,6'-(2,2'-(Pyridine-3,5-Diyl)Bis(Ethane- 2,1-Diyl))Bis(4-Methylpyridin-2-Amine)
  9. 3n6c - Structure of Endothelial Nitric Oxide Synthase H373S Single Mutant Heme Domain Complexed With 4-(2-(6-(2-(6-Amino-4-Methylpyridin-2-Yl) Ethyl)Pyridin-2-Yl)Ethyl)-6-Methylpyridin-2-Amine
  10. 3n6d - Structure of Endothelial Nitric Oxide Synthase H373S Single Mutant Heme Domain Complexed With 6,6'-(2,2'-(5-Amino-1,3-Phenylene) Bis(Ethane-2,1-Diyl))Bis(4-Methylpyridin-2-Amine)
  11. 3n6e - Structure of Endothelial Nitric Oxide Synthase N368D Mutant Heme Domain Complexed With 6,6'-(2,2'-(5-Amino-1,3-Phenylene)Bis(Ethane-2, 1-Diyl))Bis(4-Methylpyridin-2-Amine)
  12. 3n6f - Structure of Endothelial Nitric Oxide Synthase N368D Single Mutant Heme Domain Complexed With 6,6'-(2,2'-(Pyridine-3,5-Diyl)Bis(Ethane- 2,1-Diyl))Bis(4-Methylpyridin-2-Amine)
  13. 3n6g - Structure of Endothelial Nitric Oxide Synthase N368D Single Mutant Heme Domain Complexed With 4-(2-(5-(2-(6-Amino-4-Methylpyridin-2-Yl) Ethyl)Pyridin-3-Yl)Ethyl)-6-Methylpyridin-2-Amine
  14. 3n6w - Crystal Structure of Human Gamma-Butyrobetaine Hydroxylase
  15. 3n71 - Crystal Structure of Cardiac Specific Histone Methyltransferase SMYD1
  16. 3n9l - CEKDM7A From C.Elegans, Complex With H3K4ME3 Peptide and Nog
  17. 3n9m - CEKDM7A From C.Elegans, Alone
  18. 3n9n - CEKDM7A From C.Elegans, Complex With H3K4ME3K9ME2 Peptide and Nog
  19. 3n9o - CEKDM7A From C.Elegans, Complex With H3K4ME3 Peptide, H3K9ME2 Peptide and Nog
  20. 3n9p - CEKDM7A From C.Elegans, Complex With H3K4ME3K27ME2 Peptide and Nog
  21. 3n9q - CEKDM7A From C.Elegans, Complex With H3K4ME3 Peptide, H3K27ME2 Peptide and Nog
  22. 3n9r - Class II Fructose-1,6-Bisphosphate Aldolase From Helicobacter Pylori in Complex With N-(4-Hydroxybutyl)-Phosphoglycolohydroxamic Acid, A Competitive Inhibitor
  23. 3n9s - Class II Fructose-1,6-Bisphosphate Aldolase From Helicobacter Pylori in Complex With N-(4-Hydroxybutyl)- Glycolohydroxamic Acid Bis- Phosphate, A Competitive Inhibitor
  24. 3na7 - 2.2 Angstrom Structure of the HP0958 Protein From Helicobacter Pylori Ccug 17874
  25. 3na9 - Crystal Structure of FAB15
  26. 3naa - Crystal Structure of FAB15 MUT5
  27. 3nab - Crystal Structure of FAB15 MUT6
  28. 3nac - Crystal Structure of FAB15 MUT7
  29. 3nat - Crystal Structure Of Conserved Protein of Unknown Function EF_1977 From Enterococcus Faecalis
  30. 3ncj - Crystal Structure of FAB15 MUT8
  31. 3ncu - Structural and Functional Insights Into Pattern Recognition By the Innate Immune Receptor Rig-I
  32. 3ndi - X-Ray Structure of A C-3'-Methyltransferase in Complex With S- Adenosylmethionine and Dtmp
  33. 3ndj - X-Ray Structure of A C-3'-Methyltransferase in Complex With S- Adenosyl-L-Homocysteine and Sugar Product
  34. 3ne8 - The Crystal Structure Of A Domain From N-Acetylmuramoyl-L-Alanine Amidase of Bartonella Henselae Str. Houston-1
  35. 3neh - Crystal Structure Of the Protein LMO2462 From Listeria Monocytogenes Complexed With Zn and Phosphonate Mimic of Dipeptide L-Leu-D-Ala
  36. 3nf3 - Crystal Structure of Bont/A Lc With Jth-Nb-7239 Peptide
  37. 3nfz - Crystal Structure of Murine Aminoacylase 3 in Complex With N-Acetyl-L- Tyrosine
  38. 3ng2 - Crystal Structure of the RNF4 Ring Domain Dimer
  39. 3ngj - Crystal Structure of A Putative Deoxyribose-Phosphate Aldolase From Entamoeba Histolytica
  40. 3nh4 - Crystal Structure of Murine Aminoacylase 3
  41. 3nh5 - Crystal Structure of E177A-Mutant Murine Aminoacylase 3
  42. 3nh8 - Crystal Structure of Murine Aminoacylase 3 in Complex With N-Acetyl-S- 1,2-Dichlorovinyl-L-Cysteine
  43. 3nhe - High Resolution Structure (1.26A) of USP2A in Complex With Ubiquitin
  44. 3nih - The Structure of Ubr Box (Riaaa)
  45. 3nii - The Structure of Ubr Box (Kiaa)
  46. 3nij - The Structure of Ubr Box (Hiaa)
  47. 3nik - The Structure of Ubr Box (Reaa)
  48. 3nil - The Structure of Ubr Box (Rdaa)
  49. 3nim - The Structure of Ubr Box (Rraa)
  50. 3nin - The Structure of Ubr Box (Rlges)


Acknowledgement

We would like to acknowledge that these pictures of PDB structures of Zinc coordination spheres were produced with valuable advice from our colleagues from http://3dpdb.com.
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