Chemical elements
  Zinc
    Isotopes
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    Physical Properties
    Chemical Properties
    PDB 12ca-1ai0
    PDB 1aiy-1b6z
    PDB 1b71-1bs8
    PDB 1bsk-1cao
    PDB 1caq-1ctt
    PDB 1ctu-1de6
    PDB 1def-1dy0
    PDB 1dy1-1ed6
    PDB 1ed8-1exk
    PDB 1eyf-1fj9
    PDB 1fjg-1g0e
    PDB 1g0f-1gkq
    PDB 1gkr-1ha5
    PDB 1hbm-1hso
    PDB 1hsz-1i6v
    PDB 1i73-1im5
    PDB 1iml-1jcv
    PDB 1jcz-1jy8
    PDB 1jyb-1kh4
    PDB 1kh5-1kys
    PDB 1kzo-1llm
    PDB 1llu-1m7j
    PDB 1m9j-1mwo
    PDB 1mwq-1ndv
    PDB 1ndw-1nyq
    PDB 1nyr-1os4
    PDB 1os9-1p9w
    PDB 1paa-1pud
    PDB 1pv8-1q9l
    PDB 1q9m-1qv6
    PDB 1qv7-1r6o
    PDB 1r79-1ro9
    PDB 1ror-1sfo
    PDB 1sg0-1t3k
    PDB 1t4k-1tkh
    PDB 1tkj-1u0l
    PDB 1u10-1ums
    PDB 1umt-1v67
    PDB 1v6g-1vrq
    PDB 1vs0-1wew
    PDB 1wfe-1wwf
    PDB 1wwg-1xb1
    PDB 1xb8-1xpz
    PDB 1xq0-1y5w
    PDB 1y5x-1ylk
    PDB 1ylo-1z8r
    PDB 1z93-1zkx
    PDB 1zl6-258l
    PDB 2a03-2afo
    PDB 2afs-2atq
    PDB 2au3-2bfz
    PDB 2bg2-2c3a
    PDB 2c4r-2cij
    PDB 2cim-2czr
    PDB 2d0w-2djw
    PDB 2dkc-2e1b
    PDB 2e1s-2eer
    PDB 2eex-2em4
    PDB 2em5-2eoj
    PDB 2eok-2erq
    PDB 2esf-2fa7
    PDB 2fac-2fpx
    PDB 2fqp-2g84
    PDB 2g87-2gvf
    PDB 2gvi-2han
    PDB 2hap-2huc
    PDB 2hue-2imc
    PDB 2imr-2j65
    PDB 2j6a-2jq5
    PDB 2jr7-2kfn
    PDB 2kft-2l75
    PDB 2lgv-2nx9
    PDB 2nxa-2oc8
    PDB 2occ-2osm
    PDB 2oso-2p53
    PDB 2p57-2pow
    PDB 2ppb-2q8j
    PDB 2qa1-2qp6
    PDB 2qpj-2r71
    PDB 2r74-2sod
    PDB 2srt-2v86
    PDB 2v87-2vp7
    PDB 2vpb-2vyo
    PDB 2vz5-2wey
    PDB 2wfq-2wx0
    PDB 2wx1-2xam
    PDB 2xan-2xr9
    PDB 2xrg-2ytd
    PDB 2yte-2z30
    PDB 2z3g-2zet
    PDB 2zh0-3a32
    PDB 3a36-3aoi
    PDB 3at1-3bk1
    PDB 3bk2-3byr
    PDB 3byw-3cia
    PDB 3ciz-3d08
    PDB 3d09-3dbu
    PDB 3dc3-3dp6
    PDB 3dpe-3e1w
    PDB 3e1z-3ebh
    PDB 3ebi-3epk
    PDB 3epl-3f28
    PDB 3f2b-3fhe
    PDB 3fhp-3ful
    PDB 3fum-3g9y
    PDB 3ga3-3gpu
    PDB 3gpx-3h2w
    PDB 3h3e-3hfy
    PDB 3hgz-3hsn
    PDB 3hso-3i8v
    PDB 3i9b-3ij6
    PDB 3ijf-3ixe
    PDB 3iz0-3k34
    PDB 3k35-3kiy
    PDB 3kj1-3kvt
      3kj1
      3kj2
      3kj4
      3kj7
      3kjh
      3kji
      3kkt
      3kkx
      3kl7
      3kl9
      3km1
      3km2
      3km8
      3kmc
      3kmd
      3kme
      3kmp
      3kn2
      3knh
      3kni
      3knj
      3knk
      3knl
      3knm
      3knn
      3kno
      3knr
      3kns
      3knv
      3knx
      3kq6
      3kqi
      3kqx
      3kqz
      3kr4
      3kr5
      3kr7
      3kr8
      3krv
      3kry
      3ks3
      3ksl
      3ksq
      3ksv
      3kui
      3kv4
      3kv5
      3kv6
      3kve
      3kvt
    PDB 3kwa-3lat
    PDB 3lcn-3lrr
    PDB 3ls1-3m1n
    PDB 3m1v-3mek
    PDB 3men-3mru
    PDB 3ms0-3n63
    PDB 3n64-3nin
    PDB 3nis-3ny2
    PDB 3ny3-3ohc
    PDB 3ohd-3oyl
    PDB 3oym-3pih
    PDB 3pki-3r0d
    PDB 3rj7-3t74
    PDB 3t87-3u9g
    PDB 3ua7-3v24
    PDB 3v25-4agl
    PDB 4agm-4dih
    PDB 4dii-4efs
    PDB 4eg2-4fc8
    PDB 4fgm-6tli
    PDB 6tmn-9nse

Zinc in PDB, part 115 (5701-5750), PDB files 3kj1 - 3kvt






Experimental structures of coordination spheres of Zinc (Zn) in bioorganic molecules from X-Ray and NMR experiments. Coordination spheres were calculated with 5.0 Angstroms radius around Zinc atoms.
PDB files 5701-5750 (3kj1 - 3kvt):
  1. 3kj1 - Mcl-1 in Complex With Bim BH3 Mutant I2DA
  2. 3kj2 - Mcl-1 in Complex With Bim BH3 Mutant F4AE
  3. 3kj4 - Structure of Rat Nogo Receptor Bound to 1D9 Antagonist Antibody
  4. 3kj7 - Crystal Structure Of the Complex Of C-Lobe of Bovine Lactoferrin With Dextrin At 1.9 A Resolution
  5. 3kjh - Zn-Bound State of COOC1
  6. 3kji - Zn and Adp Bound State of COOC1
  7. 3kkt - Crystal Structure Of Human PDE4B With 5-[3-[(1S,2S,4R)- Bicyclo[2.2.1]Hept-2-Yloxy]-4-Methoxyp Henyl]Tetrahydro-2(1H)- Pyrimidinone Reveals Ordering of the C-Terminal Helix Residues 502- 509.
  8. 3kkx - Neutron Structure of Human Carbonic Anhydrase II
  9. 3kl7 - Crystal Structure of Putative Metal-Dependent Hydrolase (YP_001302908.1) From Parabacteroides Distasonis Atcc 8503 At 2.30 A Resolution
  10. 3kl9 - Crystal Structure of Pepa From Streptococcus Pneumoniae
  11. 3km1 - Zinc-Reconstituted Tomato Chloroplast Superoxide Dismutase
  12. 3km2 - As-Isolated Tomato Chloroplast Superoxide Dismutase
  13. 3km8 - Crystal Structuore of Adenosine Deaminase From Mus Musculus Complexed With 9-Deazainosine
  14. 3kmc - Crystal Structure Of Catalytic Domain of Tace With Tartrate-Based Inhibitor
  15. 3kmd - Crystal Structure of the P53 Core Domain Bound to A Full Consensus Site As A Self-Assembled Tetramer
  16. 3kme - Crystal Structure Of Catalytic Domain of Tace With Phenyl- Pyrrolidinyl-Tartrate Inhibitor
  17. 3kmp - Crystal Structure of SMAD1-MH1/Dna Complex
  18. 3kn2 - Hcv NS3 Protease Domain With Ketoamide Inhibitor
  19. 3knh - The Structures of Viomycin Bound to The 70S Ribosome. This File Contains the 30S Subunit For Molecule I
  20. 3kni - The Structures of Viomycin Bound to The 70S Ribosome. This File Contains the 50S Subunit For Molecule I
  21. 3knj - The Structures of Viomycin Bound to The 70S Ribosome. This File Contains the 30S Subunit For Molecule II'
  22. 3knk - The Structures of Viomycin Bound to The 70S Ribosome. This File Contains the 50S Subunit For Molecule II.
  23. 3knl - The Structures of Capreomycin Bound to The 70S Ribosome. This File Contains the 30S Subunit For Molecule I
  24. 3knm - The Structures of Capreomycin Bound to The 70S Ribosome. This File Contains the 50S Subunit For Molecule I.
  25. 3knn - The Structures of Capreomycin Bound to The 70S Ribosome. This File Contains the 30S Subunit For Molecule II
  26. 3kno - The Structures of Capreomycin Bound to The 70S Ribosome. This File Contains the 50S Subunit For Molecule II
  27. 3knr - Bacillus Cereus Metallo-Beta-Lactamase CYS221ASP Mutant, 1 Mm Zn(II)
  28. 3kns - Bacillus Cereus Metallo-Beta-Lactamase CYS221ASP Mutant, 20 Mm Zn(II)
  29. 3knv - Crystal Structure Of the Ring and First Zinc Finger Domains of TRAF2
  30. 3knx - Hcv NS3 Protease Domain With P1-P3 Macrocyclic Ketoamide Inhibitor
  31. 3kq6 - Enhancing the Therapeutic Properties Of A Protein By A Designed Zinc- Binding Site, Structural Principles of A Novel Long-Acting Insulin Analog
  32. 3kqi - Crystal Structure of PHF2 Phd Domain Complexed With H3K4ME3 Peptide
  33. 3kqx - Structure of A Protease 1
  34. 3kqz - Structure of A Protease 2
  35. 3kr4 - Structure of A Protease 3
  36. 3kr5 - Structure of A Protease 4
  37. 3kr7 - Human Tankyrase 2 - Catalytic Parp Domain
  38. 3kr8 - Human Tankyrase 2 - Catalytic Parp Domain in Complex With An Inhibitor XAV939
  39. 3krv - The Structure of Potential Metal-Dependent Hydrolase With Cyclase Activity
  40. 3kry - Crystal Structure of Mmp-13 in Complex With Sc-78080
  41. 3ks3 - High Resolution Structure of Human Carbonic Anhydrase II At 0.9 A
  42. 3ksl - Structure of Fpt Bound to Datfp-Dh-Gpp
  43. 3ksq - Discovery of C-Imidazole Azaheptapyridine Fpt Inhibitors
  44. 3ksv - Hypothetical Protein From Leishmania Major
  45. 3kui - Crystal Structure Of C-Terminal Domain Of PABPC1 in Complex With Binding Region of ERF3A
  46. 3kv4 - Structure of PHF8 in Complex With Histone H3
  47. 3kv5 - Structure of KIAA1718, Human Jumonji Demethylase, in Complex With N-Oxalylglycine
  48. 3kv6 - Structure of KIAA1718, Human Jumonji Demethylase, in Complex With Alpha-Ketoglutarate
  49. 3kve - Structure Of Native L-Amino Acid Oxidase From Vipera Ammodytes Ammodytes: Stabilization of The Quaternary Structure By Divalent Ions and Structural Changes in the Dynamic Active Site
  50. 3kvt - Tetramerization Domain From AKV3.1 (Shaw-Subfamily) Voltage-Gated Potassium Channel


Acknowledgement

We would like to acknowledge that these pictures of PDB structures of Zinc coordination spheres were produced with valuable advice from our colleagues from http://3dpdb.com.
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