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Zinc in PDB 4g2z: Crystal Structure of C-Lobe of Bovine Lactoferrin Complexed with Mefenamic Acid at 1.90 A Resolution

Protein crystallography data

The structure of Crystal Structure of C-Lobe of Bovine Lactoferrin Complexed with Mefenamic Acid at 1.90 A Resolution, PDB code: 4g2z was solved by P.K.Shukla, L.Gautam, M.Sinha, P.Kaur, S.Sharma, T.P.Singh, with X-Ray Crystallography technique. A brief refinement statistics is given in the table below:

Resolution Low / High (Å) 19.92 / 1.90
Space group P 1 21 1
Cell size a, b, c (Å), α, β, γ (°) 62.388, 49.830, 65.323, 90.00, 107.05, 90.00
R / Rfree (%) 14.8 / 19.1

Other elements in 4g2z:

The structure of Crystal Structure of C-Lobe of Bovine Lactoferrin Complexed with Mefenamic Acid at 1.90 A Resolution also contains other interesting chemical elements:

Iron (Fe) 1 atom

Zinc Binding Sites:

The binding sites of Zinc atom in the Crystal Structure of C-Lobe of Bovine Lactoferrin Complexed with Mefenamic Acid at 1.90 A Resolution (pdb code 4g2z). This binding sites where shown within 5.0 Angstroms radius around Zinc atom.
In total 2 binding sites of Zinc where determined in the Crystal Structure of C-Lobe of Bovine Lactoferrin Complexed with Mefenamic Acid at 1.90 A Resolution, PDB code: 4g2z:
Jump to Zinc binding site number: 1; 2;

Zinc binding site 1 out of 2 in 4g2z

Go back to Zinc Binding Sites List in 4g2z
Zinc binding site 1 out of 2 in the Crystal Structure of C-Lobe of Bovine Lactoferrin Complexed with Mefenamic Acid at 1.90 A Resolution


Mono view


Stereo pair view

A full contact list of Zinc with other atoms in the Zn binding site number 1 of Crystal Structure of C-Lobe of Bovine Lactoferrin Complexed with Mefenamic Acid at 1.90 A Resolution within 5.0Å range:
probe atom residue distance (Å) B Occ
A:Zn707

b:17.1
occ:1.00
OE2 A:GLU659 2.1 17.1 1.0
OE1 A:GLU659 2.3 13.8 1.0
CD A:GLU659 2.5 15.1 1.0
O A:GLY653 3.7 21.9 1.0
CG A:GLU659 4.0 14.9 1.0
O A:ARG654 4.4 14.6 1.0
CA A:PRO655 4.6 14.9 1.0
O A:HOH916 4.7 38.4 1.0
CB A:GLU659 4.7 12.1 1.0
N A:THR656 4.8 14.4 1.0
C A:GLY653 4.9 21.0 1.0

Zinc binding site 2 out of 2 in 4g2z

Go back to Zinc Binding Sites List in 4g2z
Zinc binding site 2 out of 2 in the Crystal Structure of C-Lobe of Bovine Lactoferrin Complexed with Mefenamic Acid at 1.90 A Resolution


Mono view


Stereo pair view

A full contact list of Zinc with other atoms in the Zn binding site number 2 of Crystal Structure of C-Lobe of Bovine Lactoferrin Complexed with Mefenamic Acid at 1.90 A Resolution within 5.0Å range:
probe atom residue distance (Å) B Occ
A:Zn708

b:23.2
occ:1.00
NE2 A:HIS588 2.1 17.3 1.0
CD2 A:HIS588 3.1 16.8 1.0
CE1 A:HIS588 3.1 15.3 1.0
O A:HOH827 3.9 37.8 1.0
ND1 A:HIS588 4.2 18.0 1.0
CG A:HIS588 4.2 15.1 1.0
CG2 A:VAL591 4.4 19.7 1.0
O A:HOH884 4.6 19.8 1.0
O A:HOH1082 4.9 41.6 1.0

Reference:

P.K.Shukla, L.Gautam, M.Sinha, P.Kaur, S.Sharma, T.P.Singh. Crystal Structure of C-Lobe of Bovine Lactoferrin Complexed with Mefenamic Acid at 1.90 A Resolution To Be Published.
Page generated: Sat Oct 26 23:07:24 2024

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