Experimental structures of coordination spheres of Zinc (Zn) in bioorganic molecules from X-Ray and NMR experiments. Coordination spheres were calculated with 5.0 Angstroms radius around Zinc atoms.
PDB files 4801-4850 (3d09 - 3dbu):- 3d09 - Human P53 Core Domain With Hot Spot Mutation R249S And Second-Site Suppressor Mutations H168R and T123A
- 3d0a - Human P53 Core Domain With Hot Spot Mutation R249S and Second Site Suppressor Mutation H168R in Sequence-Specific Complex With Dna
- 3d0g - Crystal Structure of Spike Protein Receptor-Binding Domain From the 2002-2003 Sars Coronavirus Human Strain Complexed With Human-Civet Chimeric Receptor ACE2
- 3d0h - Crystal Structure of Spike Protein Receptor-Binding Domain From the 2002-2003 Sars Coronavirus Civet Strain Complexed With Human-Civet Chimeric Receptor ACE2
- 3d0i - Crystal Structure of Spike Protein Receptor-Binding Domain From the 2005-2006 Sars Coronavirus Civet Strain Complexed With Human-Civet Chimeric Receptor ACE2
- 3d0n - Crystal Structure of Human Carbonic Anhydrase XIII
- 3d0y - Crystal Structure of S100B in the Calcium and Zinc Loaded State At pH 6.5
- 3d10 - Crystal Structure of S100B in the Calcium and Zinc Loaded State At pH 10.0
- 3d1m - Crystal Structure Of Sonic Hedgehog Bound to the Third Fniii Domain of Cdo
- 3d1t - Crystal Structure of Gcyh-Ib
- 3d2n - Crystal Structure of MBNL1 Tandem Zinc Finger 1 and 2 Domain
- 3d2q - Crystal Structure of MBNL1 Tandem Zinc Finger 3 and 4 Domain
- 3d2s - Crystal Structure of MBNL1 Tandem Zinc Finger 3 and 4 Domain in Complex With Cgcugu Rna
- 3d2z - Complex of The N-Acetylmuramyl-L-Alanine Amidase Amid From E.Coli With the Product L-Ala-D-Gamma-Glu-L-Lys
- 3d3p - Crystal Structure of PDE4B Catalytic Domain in Complex With A Pyrazolopyridine Inhibitor
- 3d3x - Crystal Structure of Botulinum Neurotoxin Serotype E Catalytic Domain in Complex With Snap-25 Substrate Peptide
- 3d4b - Crystal Structure of SIR2TM in Complex With Acetyl P53 Peptide and Dadme-Nad+
- 3d4u - Bovine Thrombin-Activatable Fibrinolysis Inhibitor (Tafia) in Complex With Tick-Derived Carboxypeptidase Inhibitor.
- 3d4y - Golgi Mannosidase II Complex With Mannoimidazole
- 3d4z - Golgi Mannosidase II Complex With Gluco-Imidazole
- 3d50 - Golgi Mannosidase II Complex With N-Octyl-6-Epi-Valienamine
- 3d51 - Golgi Mannosidase II Complex With Gluco-Hydroxyiminolactam
- 3d52 - Golgi Mannosidase II Complex With An N-Aryl Carbamate Derivative of Gluco-Hydroxyiminolactam
- 3d5a - Structural Basis For Translation Termination on The 70S Ribosome. This File Contains The 30S Subunit, Release Factor 1 (RF1), Two Trna, and Mrna Molecules of One 70S Ribosome. the Entire Crystal Structure Contains Two 70S Ribosomes As Described in Remark 400.
- 3d5c - Structural Basis For Translation Termination on The 70S Ribosome. This File Contains The 30S Subunit, Release Factor 1 (RF1), Two Trna, and Mrna Molecules of The Second 70S Ribosome. the Entire Crystal Structure Contains Two 70S Ribosomes As Described in Remark 400.
- 3d66 - Crystal Structure of Thrombin-Activatable Fibrinolysis Inhibitor (Tafi)
- 3d67 - Crystal Structure of Thrombin-Activatable Fibrinolysis Inhibitor (Tafi) in Complex With 2-Guanidino-Ethyl-Mercaptosuccinic Acid (Gemsa)
- 3d68 - Crystal Structure Of A T325I/T329I/H333Y/H335Q Mutant of Thrombin- Activatable Fibrinolysis Inhibitor (Tafi-Iiyq)
- 3d6n - Crystal Structure of Aquifex Dihydroorotase Activated By Aspartate Transcarbamoylase
- 3d71 - Crystal Structure of E253Q Bmrr Bound to 22 Base Pair Promoter Site
- 3d7d - A High Resolution Crystal Structure of Human Glutamate Carboxypeptidase II (Gcpii) in A Complex With Dcfbd, A Urea-Based Inhibitor
- 3d7f - A High Resolution Crystal Structure of Human Glutamate Carboxypeptidase II (Gcpii) in A Complex With Dcit, A Urea-Based Inhibitor
- 3d7g - A High Resolution Crystal Structure of Human Glutamate Carboxypeptidase II (Gcpii) in A Complex With Dcmc, A Urea-Based Inhibitor
- 3d7h - A High Resolution Crystal Structure of Human Glutamate Carboxypeptidase II (Gcpii) in A Complex With Dcibzl, A Urea-Based Inhibitor
- 3d7s - Crystal Structure of Wild-Type E. Coli Asparate Transcarbamoylase At pH 8.5 At 2.80 A Resolution
- 3d7v - Crystal Structure of Mcl-1 in Complex With An Mcl-1 Selective BH3 Ligand
- 3d81 - SIR2-S-Alkylamidate Complex Crystal Structure
- 3d8c - Factor Inhibiting Hif-1 Alpha D201G Mutant in Complex With Zn(II), Alpha-Ketoglutarate and Hif-1 Alpha 19MER
- 3d8w - Use Of A Carbonic Anhydrase II, IX Active-Site Mimic, For the Purpose of Screening Inhibitors For Possible Anti- Cancer Properties
- 3d92 - Human Carbonic Anhydrase II Bound With Substrate Carbon Dioxide
- 3d9t - CIAP1-BIR3 in Complex With N-Terminal Peptide From Caspase- 9 (Atpfqe)
- 3d9u - The BIR3 Domain of CIAP1 in Complex With the N Terminal Peptide From Smac/Diablo (Avpiaq).
- 3d9z - Use Of Carbonic Anhydrase II, IX Active-Site Mimic, For the Purpose of Screening Inhibitors For Possible Anti-Cancer Properties
- 3da2 - X-Ray Structure of Human Carbonic Anhydrase 13 in Complex With Inhibitor
- 3daz - Use Of Carbonic Anhydrase II, IX Active-Site Mimic, For the Purpose of Screening Inhibitors For Possible Anti-Cancer Properties
- 3dbh - Structural Dissection Of A Gating Mechanism Preventing Misactivation of Ubiquitin By NEDD8'S E1 (APPBP1- UBA3ARG190ALA-NEDD8ALA72ARG)
- 3dbk - Pseudomonas Aeruginosa Elastase With Phosphoramidon
- 3dbl - Structural Dissection Of A Gating Mechanism Preventing Misactivation of Ubiquitin By NEDD8'S E1 (APPBP1- UBA3ARG190WT-NEDD8ALA72GLN)
- 3dbr - Structural Dissection Of A Gating Mechanism Preventing Misactivation of Ubiquitin By NEDD8'S E1 (APPBP1- UBA3ARG190GLN-NEDD8ALA72ARG)
- 3dbu - Use Of Carbonic Anhydrase II, IX Active-Site Mimic, For the Purpose of Screening Inhibitors For Possible Anti-Cancer Properties
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| We would like to acknowledge that these pictures of PDB structures of Zinc coordination spheres were produced with valuable advice from our colleagues from http://3dpdb.com. |