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Chemical elements
  Zinc
    Isotopes
    Energy
    Production
    Application
    Physical Properties
    Chemical Properties
    PDB 12ca-1ai0
    PDB 1aiy-1b6z
    PDB 1b71-1bs8
    PDB 1bsk-1cao
    PDB 1caq-1ctt
    PDB 1ctu-1de6
    PDB 1def-1dy0
    PDB 1dy1-1ed6
    PDB 1ed8-1exk
    PDB 1eyf-1fj9
    PDB 1fjg-1g0e
    PDB 1g0f-1gkq
    PDB 1gkr-1ha5
    PDB 1hbm-1hso
    PDB 1hsz-1i6v
    PDB 1i73-1im5
    PDB 1iml-1jcv
    PDB 1jcz-1jy8
    PDB 1jyb-1kh4
    PDB 1kh5-1kys
    PDB 1kzo-1llm
    PDB 1llu-1m7j
    PDB 1m9j-1mwo
    PDB 1mwq-1ndv
    PDB 1ndw-1nyq
    PDB 1nyr-1os4
    PDB 1os9-1p9w
    PDB 1paa-1pud
    PDB 1pv8-1q9l
    PDB 1q9m-1qv6
    PDB 1qv7-1r6o
    PDB 1r79-1ro9
    PDB 1ror-1sfo
    PDB 1sg0-1t3k
    PDB 1t4k-1tkh
    PDB 1tkj-1u0l
    PDB 1u10-1ums
    PDB 1umt-1v67
    PDB 1v6g-1vrq
    PDB 1vs0-1wew
    PDB 1wfe-1wwf
    PDB 1wwg-1xb1
    PDB 1xb8-1xpz
    PDB 1xq0-1y5w
    PDB 1y5x-1ylk
    PDB 1ylo-1z8r
    PDB 1z93-1zkx
    PDB 1zl6-258l
    PDB 2a03-2afo
    PDB 2afs-2atq
    PDB 2au3-2bfz
    PDB 2bg2-2c3a
    PDB 2c4r-2cij
    PDB 2cim-2czr
    PDB 2d0w-2djw
    PDB 2dkc-2e1b
    PDB 2e1s-2eer
    PDB 2eex-2em4
    PDB 2em5-2eoj
    PDB 2eok-2erq
    PDB 2esf-2fa7
    PDB 2fac-2fpx
    PDB 2fqp-2g84
    PDB 2g87-2gvf
    PDB 2gvi-2han
    PDB 2hap-2huc
    PDB 2hue-2imc
    PDB 2imr-2j65
    PDB 2j6a-2jq5
    PDB 2jr7-2kfn
    PDB 2kft-2l75
    PDB 2lgv-2nx9
    PDB 2nxa-2oc8
    PDB 2occ-2osm
    PDB 2oso-2p53
    PDB 2p57-2pow
    PDB 2ppb-2q8j
    PDB 2qa1-2qp6
    PDB 2qpj-2r71
    PDB 2r74-2sod
    PDB 2srt-2v86
    PDB 2v87-2vp7
    PDB 2vpb-2vyo
    PDB 2vz5-2wey
    PDB 2wfq-2wx0
    PDB 2wx1-2xam
    PDB 2xan-2xr9
    PDB 2xrg-2ytd
      2xrg
      2xs3
      2xs4
      2xsc
      2xsn
      2xum
      2xva
      2xwc
      2xzm
      2xzn
      2y0m
      2y0s
      2y1h
      2y33
      2y5q
      2y69
      2yb3
      2ygt
      2yhe
      2yhw
      2yhy
      2yi1
      2yik
      2yql
      2yqm
      2yqp
      2yqq
      2yr2
      2yrc
      2yrd
      2yre
      2yrg
      2yrh
      2yrj
      2yrk
      2yrm
      2yrt
      2ys2
      2ysa
      2ysj
      2ysl
      2ysm
      2yso
      2ysp
      2ysv
      2yt5
      2yt9
      2yta
      2ytb
      2ytd
    PDB 2yte-2z30
    PDB 2z3g-2zet
    PDB 2zh0-3a32
    PDB 3a36-3aoi
    PDB 3at1-3bk1
    PDB 3bk2-3byr
    PDB 3byw-3cia
    PDB 3ciz-3d08
    PDB 3d09-3dbu
    PDB 3dc3-3dp6
    PDB 3dpe-3e1w
    PDB 3e1z-3ebh
    PDB 3ebi-3epk
    PDB 3epl-3f28
    PDB 3f2b-3fhe
    PDB 3fhp-3ful
    PDB 3fum-3g9y
    PDB 3ga3-3gpu
    PDB 3gpx-3h2w
    PDB 3h3e-3hfy
    PDB 3hgz-3hsn
    PDB 3hso-3i8v
    PDB 3i9b-3ij6
    PDB 3ijf-3ixe
    PDB 3iz0-3k34
    PDB 3k35-3kiy
    PDB 3kj1-3kvt
    PDB 3kwa-3lat
    PDB 3lcn-3lrr
    PDB 3ls1-3m1n
    PDB 3m1v-3mek
    PDB 3men-3mru
    PDB 3ms0-3n63
    PDB 3n64-3nin
    PDB 3nis-3ny2
    PDB 3ny3-3ohc
    PDB 3ohd-3oyl
    PDB 3oym-3pih
    PDB 3pki-3r0d
    PDB 3rj7-3t74
    PDB 3t87-3u9g
    PDB 3ua7-3v24
    PDB 3v25-4agl
    PDB 4agm-4dih
    PDB 4dii-4efs
    PDB 4eg2-4fc8
    PDB 4fgm-6tli
    PDB 6tmn-9nse

Zinc in PDB, part 88 (4351-4400), PDB files 2xrg - 2ytd

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Experimental structures of coordination spheres of Zinc (Zn) in bioorganic molecules from X-Ray and NMR experiments. Coordination spheres were calculated with 5.0 Angstroms radius around Zinc atoms.
PDB files 4351-4400 (2xrg - 2ytd):

2xrg - Crystal Structure of Autotaxin (ENPP2) in Complex With the HA155 Boronic Acid Inhibitor
2xs3 - Structure of Karilysin Catalytic Mmp Domain
2xs4 - Structure of Karilysin Catalytic Mmp Domain in Complex With Magnesium
2xsc - Crystal Structure Of the Cell-Binding B Oligomer of Verotoxin-1 From E. Coli
2xsn - Crystal Structure of Human Tyrosine Hydroxylase Catalytic Domain
2xum - Factor Inhibiting Hif (Fih) Q239H Mutant in Complex With Zn(II), Nog and Asp-Substrate Peptide (20-Mer)
2xva - Crystal Structure of the Tellurite Detoxification Protein Tehb From E. Coli in Complex With Sinefungin
2xwc - Crystal Structure Of the Dna Binding Domain of Human TP73 Refined At 1.8 A Resolution
2xzm - Crystal Structure of The Eukaryotic 40S Ribosomal Subunit in Complex With Initiation Factor 1. This File Contains the 40S Subunit and Initiation Factor For Molecule 1
2xzn - Crystal Structure of The Eukaryotic 40S Ribosomal Subunit in Complex With Initiation Factor 1. This File Contains the 40S Subunit and Initiation Factor For Molecule 2
2y0m - Crystal Structure of the Complex Between Dosage Compensation Factors MSL1 and Mof
2y0s - Crystal Structure of Sulfolobus Shibatae Rna Polymerase in P21 Space Group
2y1h - Crystal Structure of the Human Tatd-Domain Protein 3 (TATDN3)
2y33 - S-Nitrosylated PHD2 (Gsno Soaked) in Complex With Zn(II) and UN9
2y5q - Listeria Monocytogenes Inlb (Internalin B) Residues 36-392
2y69 - Bovine Heart Cytochrome C Oxidase Re-Refined With Molecular Oxygen
2yb3 - Structure of Insulin Degrading Enzyme With Compound (41367)
2ygt - Clostridium Perfringens Delta-Toxin
2yhe - Structure Determination of the Stereoselective Inverting Sec-Alkylsulfatase PISA1 From Pseudomonas Sp.
2yhw - High-Resolution Crystal Structures of N-Acetylmannosamine Kinase: Insights About Substrate Specificity, Activity and Inhibitor Modelling.
2yhy - Structure of N-Acetylmannosamine Kinase in Complex With N- Acetylmannosamine and Adp
2yi1 - Crystal Structure of N-Acetylmannosamine Kinase in Complex With N-Acetyl Mannosamine 6-Phosphate and Adp.
2yik - Catalytic Domain of Clostridium Thermocellum Celt
2yql - Solution Structure of the Phd Domain in Phd Finger Protein 21A
2yqm - Solution Structure of the Fyve Domain in Zinc Finger Fyve Domain-Containing Protein 12
2yqp - Solution Structure of the Zf-Hit Domain in Dead (Asp-Glu- Ala-Asp) Box Polypeptide 59
2yqq - Solution Structure of the Zf-Hit Domain in Zinc Finger Hit Domain-Containing Protein 3 (Trip-3)
2yr2 - Crystal Structure of the Hypothetical Regulator From Sulfolobus Tokodaii
2yrc - Solution Structure of the Zf-SEC23_SEC24 From Human SEC23A
2yrd - Solution Structure of the Zf-SEC23_SEC24 From Human SEC23A Mutant V69A
2yre - Solution Structure of the Zinc Finger Domains (1-87) From Human F-Box Only Protein
2yrg - Solution Structure of the B-Box Domain From Tripartite Motif-Containing Protein 5
2yrh - Solution Structure of the C2H2-Type Zinc Finger Domain (699- 729) From Zinc Finger Protein 473
2yrj - Solution Structure of the C2H2-Type Zinc Finger Domain (781- 813) From Zinc Finger Protein 473
2yrk - Solution Structure of the Zf-C2H2 Domain in Zinc Finger Homeodomain 4
2yrm - Solution Structure of the 1ST Zf-C2H2 Domain From Human B- Cell Lymphoma 6 Protein
2yrt - Solution Structure Of the Chord Domain of Human Chord- Containing Protein 1
2ys2 - Solution Structure Of the Btk Motif of Human Cytoplasmic Tyrosine-Protein Kinase Bmx
2ysa - Solution Structure of The Zinc Finger Cchc Domain From the Human Retinoblastoma-Binding Protein 6 (Retinoblastoma- Binding Q Protein 1, Rbq-1)
2ysj - Solution Structure of the Ring Domain (1-56) From Tripartite Motif-Containing Protein 31
2ysl - Solution Structure of the Ring Domain (1-66) From Tripartite Motif-Containing Protein 31
2ysm - Solution Structure of the First and Second Phd Domain From Myeloid/Lymphoid Or Mixed-Lineage Leukemia Protein 3 Homolog
2yso - Solution Structure Of the C2H2 Type Zinc Finger (Region 656- 688) of Human Zinc Finger Protein 95 Homolog
2ysp - Solution Structure Of the C2H2 Type Zinc Finger (Region 507- 539) of Human Zinc Finger Protein 224
2ysv - Solution Structure of C2H2 Type Zinc Finger Domain 17 in Zinc Finger Protein 473
2yt5 - Solution Structure Of the Phd Domain of Metal-Response Element-Binding Transcription Factor 2
2yt9 - Solution Structure of C2H2 Type Zinc Finger Domain 345 in Zinc Finger Protein 278
2yta - Solution Structure of C2H2 Type Zinc Finger Domain 3 in Zinc Finger Protein 32
2ytb - Solution Structure of C2H2 Type Zinc Finger Domain 5 in Zinc Finger Protein 32
2ytd - Solution Structure Of the C2H2 Type Zinc Finger (Region 426- 458) of Human Zinc Finger Protein 473

Acknowledgement

We would like to acknowledge that these pictures of PDB structures of Zinc coordination spheres were produced with valuable advice from our colleagues from http://3dpdb.com.