Chemical elements
  Zinc
    Isotopes
    Energy
    Production
    Application
    Physical Properties
    Chemical Properties
    PDB 12ca-1ai0
    PDB 1aiy-1b6z
    PDB 1b71-1bs8
    PDB 1bsk-1cao
    PDB 1caq-1ctt
    PDB 1ctu-1de6
    PDB 1def-1dy0
    PDB 1dy1-1ed6
    PDB 1ed8-1exk
    PDB 1eyf-1fj9
    PDB 1fjg-1g0e
    PDB 1g0f-1gkq
    PDB 1gkr-1ha5
    PDB 1hbm-1hso
    PDB 1hsz-1i6v
    PDB 1i73-1im5
    PDB 1iml-1jcv
    PDB 1jcz-1jy8
    PDB 1jyb-1kh4
    PDB 1kh5-1kys
    PDB 1kzo-1llm
    PDB 1llu-1m7j
    PDB 1m9j-1mwo
    PDB 1mwq-1ndv
    PDB 1ndw-1nyq
    PDB 1nyr-1os4
    PDB 1os9-1p9w
    PDB 1paa-1pud
    PDB 1pv8-1q9l
    PDB 1q9m-1qv6
    PDB 1qv7-1r6o
    PDB 1r79-1ro9
    PDB 1ror-1sfo
    PDB 1sg0-1t3k
    PDB 1t4k-1tkh
    PDB 1tkj-1u0l
    PDB 1u10-1ums
    PDB 1umt-1v67
    PDB 1v6g-1vrq
    PDB 1vs0-1wew
    PDB 1wfe-1wwf
    PDB 1wwg-1xb1
    PDB 1xb8-1xpz
    PDB 1xq0-1y5w
    PDB 1y5x-1ylk
    PDB 1ylo-1z8r
    PDB 1z93-1zkx
    PDB 1zl6-258l
    PDB 2a03-2afo
    PDB 2afs-2atq
    PDB 2au3-2bfz
    PDB 2bg2-2c3a
    PDB 2c4r-2cij
    PDB 2cim-2czr
    PDB 2d0w-2djw
    PDB 2dkc-2e1b
    PDB 2e1s-2eer
    PDB 2eex-2em4
    PDB 2em5-2eoj
    PDB 2eok-2erq
    PDB 2esf-2fa7
    PDB 2fac-2fpx
    PDB 2fqp-2g84
    PDB 2g87-2gvf
    PDB 2gvi-2han
    PDB 2hap-2huc
    PDB 2hue-2imc
    PDB 2imr-2j65
    PDB 2j6a-2jq5
    PDB 2jr7-2kfn
    PDB 2kft-2l75
    PDB 2lgv-2nx9
    PDB 2nxa-2oc8
    PDB 2occ-2osm
    PDB 2oso-2p53
    PDB 2p57-2pow
    PDB 2ppb-2q8j
    PDB 2qa1-2qp6
    PDB 2qpj-2r71
    PDB 2r74-2sod
    PDB 2srt-2v86
    PDB 2v87-2vp7
    PDB 2vpb-2vyo
    PDB 2vz5-2wey
    PDB 2wfq-2wx0
    PDB 2wx1-2xam
    PDB 2xan-2xr9
      2xan
      2xao
      2xar
      2xb1
      2xb3
      2xb4
      2xbl
      2xbq
      2xc2
      2xcf
      2xcm
      2xcn
      2xdd
      2xdt
      2xef
      2xeg
      2xei
      2xej
      2xeu
      2xev
      2xf4
      2xfz
      2xg1
      2xgw
      2xhl
      2xhm
      2xig
      2xjk
      2xjl
      2xjy
      2xjz
      2xk5
      2xl9
      2xml
      2xnj
      2xoc
      2xod
      2xoe
      2xoy
      2xoz
      2xp0
      2xpy
      2xpz
      2xq0
      2xq8
      2xqc
      2xqd
      2xqn
      2xr1
      2xr9
    PDB 2xrg-2ytd
    PDB 2yte-2z30
    PDB 2z3g-2zet
    PDB 2zh0-3a32
    PDB 3a36-3aoi
    PDB 3at1-3bk1
    PDB 3bk2-3byr
    PDB 3byw-3cia
    PDB 3ciz-3d08
    PDB 3d09-3dbu
    PDB 3dc3-3dp6
    PDB 3dpe-3e1w
    PDB 3e1z-3ebh
    PDB 3ebi-3epk
    PDB 3epl-3f28
    PDB 3f2b-3fhe
    PDB 3fhp-3ful
    PDB 3fum-3g9y
    PDB 3ga3-3gpu
    PDB 3gpx-3h2w
    PDB 3h3e-3hfy
    PDB 3hgz-3hsn
    PDB 3hso-3i8v
    PDB 3i9b-3ij6
    PDB 3ijf-3ixe
    PDB 3iz0-3k34
    PDB 3k35-3kiy
    PDB 3kj1-3kvt
    PDB 3kwa-3lat
    PDB 3lcn-3lrr
    PDB 3ls1-3m1n
    PDB 3m1v-3mek
    PDB 3men-3mru
    PDB 3ms0-3n63
    PDB 3n64-3nin
    PDB 3nis-3ny2
    PDB 3ny3-3ohc
    PDB 3ohd-3oyl
    PDB 3oym-3pih
    PDB 3pki-3r0d
    PDB 3rj7-3t74
    PDB 3t87-3u9g
    PDB 3ua7-3v24
    PDB 3v25-4agl
    PDB 4agm-4dih
    PDB 4dii-4efs
    PDB 4eg2-4fc8
    PDB 4fgm-6tli
    PDB 6tmn-9nse

Zinc in PDB, part 87 (4301-4350), PDB files 2xan - 2xr9






Experimental structures of coordination spheres of Zinc (Zn) in bioorganic molecules from X-Ray and NMR experiments. Coordination spheres were calculated with 5.0 Angstroms radius around Zinc atoms.
PDB files 4301-4350 (2xan - 2xr9):
  1. 2xan - Inositol 1,3,4,5,6-Pentakisphosphate 2-Kinase From A. Thaliana in Complex With Amp Pnp and IP5
  2. 2xao - Inositol 1,3,4,5,6-Pentakisphosphate 2-Kinase From A. Thaliana in Complex With IP5
  3. 2xar - Inositol 1,3,4,5,6-Pentakisphosphate 2-Kinase From A. Thaliana in Complex With IP6.
  4. 2xb1 - Crystal Structure of The Human PYGO2 Phd Finger in Complex With the B9L HD1 Domain
  5. 2xb3 - The Structure of Cyanobacterial Psbp
  6. 2xb4 - Crystal Structures of Zinc Containing Adenylate Kinase From Desulfovibrio Gigas
  7. 2xbl - Crystal Structure of Gmha From Burkholderia Pseudomallei in Complex With Product
  8. 2xbq - Crystal Structure of Reduced Schistosoma Mansoni Thioredoxin Pre-Protein At 1.7 Angstrom
  9. 2xc2 - Crystal Structure of Oxidized Schistosoma Mansoni Thioredoxin Pre-Protein At 1.6 Angstrom
  10. 2xcf - Crystal Structure of Hcv NS3 Protease With A Boronate Inhibitor
  11. 2xcm - Complex of HSP90 N-Terminal, SGT1 Cs and RAR1 CHORD2 Domain
  12. 2xcn - Crystal Structure of Hcv NS3 Protease With A Boronate Inhibitor
  13. 2xdd - A Processed Non-Coding Rna Regulates A Bacterial Antiviral System
  14. 2xdt - Crystal Structure Of the Soluble Domain of Human Endoplasmic Reticulum Aminopeptidase 1 ERAP1
  15. 2xef - Human Glutamate Carboxypeptidase II in Complex With Antibody-Recruiting Molecule Arm-P8
  16. 2xeg - Human Glutamate Carboxypeptidase II in Complex With Antibody-Recruiting Molecule Arm-P4
  17. 2xei - Human Glutamate Carboxypeptidase II in Complex With Antibody-Recruiting Molecule Arm-P2
  18. 2xej - Human Glutamate Carboxypeptidase II in Complex With Arm-M4, Urea-Based Inhibitor
  19. 2xeu - Ring Domain
  20. 2xev - Crystal Structure Of the Tpr Domain of Xanthomonas Campestris Ybgf
  21. 2xf4 - Crystal Structure of Salmonella Enterica Serovar Typhimurium Ycbl
  22. 2xfz - Structure Of Cytotoxic Domain Of Colicin E3 Bound to the 70S Ribosome (Part 1 of 4)
  23. 2xg1 - Structure Of Cytotoxic Domain Of Colicin E3 Bound to the 70S Ribosome (Part 3 of 4)
  24. 2xgw - Zinc-Bound Crystal Structure of Streptococcus Pyogenes Dpr
  25. 2xhl - Structure Of A Functional Derivative of Clostridium Botulinum Neurotoxin Type B
  26. 2xhm - Crystal Structure of Ance-K26 Complex
  27. 2xig - The Structure of the Helicobacter Pylori Ferric Uptake Regulator Fur Reveals Three Functional Metal Binding Sites
  28. 2xjk - Monomeric Human Cu,Zn Superoxide Dismutase
  29. 2xjl - Monomeric Human Cu,Zn Superoxide Dismutase Without Cu Ligands
  30. 2xjy - Crystal Structure of the LMO2:LDB1-Lid Complex, P21 Crystal Form
  31. 2xjz - Crystal Structure of the LMO2:LDB1-Lid Complex, C2 Crystal Form
  32. 2xk5 - Crystal Structure of K6-Linked Diubiquitin
  33. 2xl9 - Structure and Metal-Loading of A Soluble Periplasm Cupro-Protein: Zn- Cuca-Closed (Semet)
  34. 2xml - Crystal Structure of Human JMJD2C Catalytic Domain
  35. 2xnj - Crystal Structure of An Engineered Ferredoxin(Flavodoxin) Nadp(H) Reductase (Fpr) From Escherichia Coli
  36. 2xoc - C-Terminal Cysteine-Rich Domain of Human Chfr Bound to Madpr
  37. 2xod - Crystal Structure of Flavoprotein Nrdi From Bacillus Anthracis in the Oxidised Form
  38. 2xoe - Crystal Structure of Flavoprotein Nrdi From Bacillus Anthracis in the Semiquinone Form
  39. 2xoy - C-Terminal Cysteine-Rich Domain of Human Chfr Bound to P(1), P(2)-Diadenosine-5'-Pyrophosphate
  40. 2xoz - C-Terminal Cysteine Rich Domain of Human Chfr Bound to Amp
  41. 2xp0 - C-Terminal Cysteine-Rich Domain of Human Chfr
  42. 2xpy - Structure of Native Leukotriene A4 Hydrolase From Saccharomyces Cerevisiae
  43. 2xpz - Structure of Native Yeast LTA4 Hydrolase
  44. 2xq0 - Structure of Yeast LTA4 Hydrolase in Complex With Bestatin
  45. 2xq8 - Pentameric Ligand Gated Ion Channel Glic in Complex With Zinc Ion (ZN2+)
  46. 2xqc - Deinococcus Radiodurans ISDRA2 Transposase Complexed With Left End Recognition And Cleavage Site and Zn
  47. 2xqd - The Structure of Ef-Tu and Aminoacyl-Trna Bound to the 70S Ribosome With A Gtp Analog
  48. 2xqn - Complex Of The 2ND And 3RD Lim Domains Of Tes With The EVH1 Domain Of Mena and the N-Terminal Domain of Actin-Like Protein ARP7A
  49. 2xr1 - Dimeric Archaeal Cleavage and Polyadenylation Specificity Factor With N-Terminal Kh Domains (Kh-Cpsf) From Methanosarcina Mazei
  50. 2xr9 - Crystal Structure of Autotaxin (ENPP2)


Acknowledgement

We would like to acknowledge that these pictures of PDB structures of Zinc coordination spheres were produced with valuable advice from our colleagues from http://3dpdb.com.
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