Zinc in PDB 3x0d: Crystal Structure of C.Elegans PRMT7 in Complex with Sah (P43212)

The structure of Crystal Structure of C.Elegans PRMT7 in Complex with Sah (P43212), PDB code: 3x0d was solved by M.Hasegawa, S.Toma-Fukai, T.Shimizu, with X-Ray Crystallography technique. A brief refinement statistics is given in the table below:

Resolution Low / High (Å)	31.12 / 2.15
Space group	P 43 21 2
Cell size a, b, c (Å), α, β, γ (°)	114.179, 114.179, 184.012, 90.00, 90.00, 90.00
R / Rfree (%)	22 / 26.6

The binding sites of Zinc atom in the Crystal Structure of C.Elegans PRMT7 in Complex with Sah (P43212) (pdb code 3x0d). This binding sites where shown within 5.0 Angstroms radius around Zinc atom.
In total only one binding site of Zinc was determined in the Crystal Structure of C.Elegans PRMT7 in Complex with Sah (P43212), PDB code: 3x0d:

Zinc binding site 1 out of 1 in the Crystal Structure of C.Elegans PRMT7 in Complex with Sah (P43212)


Mono view


Stereo pair view

A full contact list of Zinc with other atoms in the Zn binding site number 1 of Crystal Structure of C.Elegans PRMT7 in Complex with Sah (P43212) within 5.0Å range: probe atom residue distance (Å) B Occ A:Zn702 b:66.2 occ:1.00 SG A:CYS345 2.2 62.0 1.0 ND1 A:HIS350 2.2 60.7 1.0 SG A:CYS207 2.3 71.5 1.0 SG A:CYS347 2.5 70.7 1.0 CE1 A:HIS350 3.1 60.6 1.0 CB A:CYS207 3.2 72.7 1.0 CG A:HIS350 3.3 65.7 1.0 CB A:CYS345 3.4 72.3 1.0 CB A:CYS347 3.6 70.4 1.0 CB A:HIS350 3.7 61.4 1.0 N A:CYS347 3.7 89.8 1.0 N A:HIS350 3.8 71.1 1.0 CA A:CYS345 3.9 84.4 1.0 CA A:CYS347 4.1 81.4 1.0 N A:VAL346 4.1 87.4 1.0 N A:GLY348 4.2 77.9 1.0 N A:LEU349 4.3 67.5 1.0 NE2 A:HIS350 4.3 61.6 1.0 C A:CYS345 4.3 70.6 1.0 CA A:HIS350 4.4 74.2 1.0 CA A:GLY209 4.4 80.1 1.0 CD2 A:HIS350 4.4 64.1 1.0 N A:GLY209 4.4 88.2 1.0 C A:CYS347 4.5 82.8 1.0 CA A:CYS207 4.6 82.1 1.0 CB A:LEU349 4.7 63.6 1.0 C A:LEU349 4.8 74.4 1.0 CA A:LEU349 4.8 73.0 1.0 C A:VAL346 4.8 88.5 1.0 CD1 A:ILE192 4.9 48.0 1.0 C A:GLY209 4.9 76.0 1.0

M.Hasegawa, S.Toma-Fukai, J.D.Kim, A.Fukamizu, T.Shimizu. Protein Arginine Methyltransferase 7 Has A Novel Homodimer-Like Structure Formed By Tandem Repeats Febs Lett. V. 588 1942 2014.
ISSN: ISSN 0014-5793
PubMed: 24726727
DOI: 10.1016/J.FEBSLET.2014.03.053