Chemical elements
  Zinc
    Isotopes
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    Physical Properties
    Chemical Properties
    PDB 12ca-1ai0
    PDB 1aiy-1b6z
    PDB 1b71-1bs8
    PDB 1bsk-1cao
    PDB 1caq-1ctt
    PDB 1ctu-1de6
    PDB 1def-1dy0
    PDB 1dy1-1ed6
    PDB 1ed8-1exk
    PDB 1eyf-1fj9
    PDB 1fjg-1g0e
    PDB 1g0f-1gkq
    PDB 1gkr-1ha5
    PDB 1hbm-1hso
    PDB 1hsz-1i6v
    PDB 1i73-1im5
    PDB 1iml-1jcv
    PDB 1jcz-1jy8
    PDB 1jyb-1kh4
    PDB 1kh5-1kys
    PDB 1kzo-1llm
    PDB 1llu-1m7j
    PDB 1m9j-1mwo
    PDB 1mwq-1ndv
    PDB 1ndw-1nyq
    PDB 1nyr-1os4
    PDB 1os9-1p9w
    PDB 1paa-1pud
    PDB 1pv8-1q9l
    PDB 1q9m-1qv6
    PDB 1qv7-1r6o
    PDB 1r79-1ro9
    PDB 1ror-1sfo
    PDB 1sg0-1t3k
    PDB 1t4k-1tkh
    PDB 1tkj-1u0l
    PDB 1u10-1ums
    PDB 1umt-1v67
    PDB 1v6g-1vrq
    PDB 1vs0-1wew
    PDB 1wfe-1wwf
    PDB 1wwg-1xb1
    PDB 1xb8-1xpz
    PDB 1xq0-1y5w
    PDB 1y5x-1ylk
    PDB 1ylo-1z8r
    PDB 1z93-1zkx
    PDB 1zl6-258l
    PDB 2a03-2afo
    PDB 2afs-2atq
    PDB 2au3-2bfz
    PDB 2bg2-2c3a
    PDB 2c4r-2cij
    PDB 2cim-2czr
    PDB 2d0w-2djw
    PDB 2dkc-2e1b
    PDB 2e1s-2eer
    PDB 2eex-2em4
    PDB 2em5-2eoj
    PDB 2eok-2erq
    PDB 2esf-2fa7
    PDB 2fac-2fpx
    PDB 2fqp-2g84
    PDB 2g87-2gvf
    PDB 2gvi-2han
    PDB 2hap-2huc
    PDB 2hue-2imc
    PDB 2imr-2j65
    PDB 2j6a-2jq5
      2j6a
      2j6e
      2j6x
      2j7j
      2j7u
      2j7w
      2j83
      2j87
      2j9a
      2j9r
      2j9u
      2ja1
      2ja5
      2ja6
      2ja7
      2ja8
      2jaz
      2jb0
      2jbg
      2jbj
      2jbk
      2jcw
      2jd8
      2jew
      2jg4
      2jg6
      2jgo
      2jhg
      2jho
      2jig
      2jih
      2jjl
      2jjz
      2jk7
      2jks
      2jl0
      2jl3
      2jlp
      2jm1
      2jm3
      2jmd
      2jmi
      2jmj
      2jmo
      2jne
      2jnp
      2jox
      2jp9
      2jpa
      2jq5
    PDB 2jr7-2kfn
    PDB 2kft-2l75
    PDB 2lgv-2nx9
    PDB 2nxa-2oc8
    PDB 2occ-2osm
    PDB 2oso-2p53
    PDB 2p57-2pow
    PDB 2ppb-2q8j
    PDB 2qa1-2qp6
    PDB 2qpj-2r71
    PDB 2r74-2sod
    PDB 2srt-2v86
    PDB 2v87-2vp7
    PDB 2vpb-2vyo
    PDB 2vz5-2wey
    PDB 2wfq-2wx0
    PDB 2wx1-2xam
    PDB 2xan-2xr9
    PDB 2xrg-2ytd
    PDB 2yte-2z30
    PDB 2z3g-2zet
    PDB 2zh0-3a32
    PDB 3a36-3aoi
    PDB 3at1-3bk1
    PDB 3bk2-3byr
    PDB 3byw-3cia
    PDB 3ciz-3d08
    PDB 3d09-3dbu
    PDB 3dc3-3dp6
    PDB 3dpe-3e1w
    PDB 3e1z-3ebh
    PDB 3ebi-3epk
    PDB 3epl-3f28
    PDB 3f2b-3fhe
    PDB 3fhp-3ful
    PDB 3fum-3g9y
    PDB 3ga3-3gpu
    PDB 3gpx-3h2w
    PDB 3h3e-3hfy
    PDB 3hgz-3hsn
    PDB 3hso-3i8v
    PDB 3i9b-3ij6
    PDB 3ijf-3ixe
    PDB 3iz0-3k34
    PDB 3k35-3kiy
    PDB 3kj1-3kvt
    PDB 3kwa-3lat
    PDB 3lcn-3lrr
    PDB 3ls1-3m1n
    PDB 3m1v-3mek
    PDB 3men-3mru
    PDB 3ms0-3n63
    PDB 3n64-3nin
    PDB 3nis-3ny2
    PDB 3ny3-3ohc
    PDB 3ohd-3oyl
    PDB 3oym-3pih
    PDB 3pki-3r0d
    PDB 3rj7-3t74
    PDB 3t87-3u9g
    PDB 3ua7-3v24
    PDB 3v25-4agl
    PDB 4agm-4dih
    PDB 4dii-4efs
    PDB 4eg2-4fc8
    PDB 4fgm-6tli
    PDB 6tmn-9nse

Zinc in PDB, part 69 (3401-3450), PDB files 2j6a - 2jq5






Experimental structures of coordination spheres of Zinc (Zn) in bioorganic molecules from X-Ray and NMR experiments. Coordination spheres were calculated with 5.0 Angstroms radius around Zinc atoms.
PDB files 3401-3450 (2j6a - 2jq5):
  1. 2j6a - Crystal Structure of S. Cerevisiae YNR046W, A Zinc Finger Protein From the ERF1 Methyltransferase Complex.
  2. 2j6e - Crystal Structure of An Autoimmune Complex Between A Human Igm Rheumatoid Factor And IGG1 Fc Reveals A Novel Fc Epitope and Evidence For Affinity Maturation
  3. 2j6x - The Crystal Structure of Lactate Oxidase
  4. 2j7j - Invariance Of The Zinc Finger Module: A Comparison of the Free Structure With Those in Nucleic-Acid Complexes
  5. 2j7u - Dengue Virus NS5 Rna Dependent Rna Polymerase Domain
  6. 2j7w - Dengue Virus NS5 Rna Dependent Rna Polymerase Domain Complexed With 3'Dgtp
  7. 2j83 - Ulilysin Metalloprotease in Complex With Batimastat.
  8. 2j87 - Structure of Vaccinia Virus Thymidine Kinase in Complex With Dttp: Insights For Drug Design
  9. 2j9a - Bllap in Complex With Microginin FR1
  10. 2j9r - Thymidine Kinase From B. Anthracis in Complex With Dt.
  11. 2j9u - 2 Angstrom X-Ray Structure of The Yeast Escrt-I VPS28 C- Terminus in Complex With the Nzf-N Domain From Escrt-II
  12. 2ja1 - Thymidine Kinase From B. Cereus With Ttp Bound As Phosphate Donor.
  13. 2ja5 - Cpd Lesion Containing Rna Polymerase II Elongation Complex A
  14. 2ja6 - Cpd Lesion Containing Rna Polymerase II Elongation Complex B
  15. 2ja7 - Cpd Lesion Containing Rna Polymerase II Elongation Complex C
  16. 2ja8 - Cpd Lesion Containing Rna Polymerase II Elongation Complex D
  17. 2jaz - Crystal Structure Of The Mutant N560D Of the Nuclease Domain of COLE7 in Complex With IM7
  18. 2jb0 - Crystal Structure Of The Mutant H573A Of the Nuclease Domain of COLE7 in Complex With IM7
  19. 2jbg - Crystal Structure Of The Mutant N560A Of the Nuclease Domain of COLE7 in Complex With IM7
  20. 2jbj - Membrane-Bound Glutamate Carboxypeptidase II (Gcpii) in Complex With 2-Pmpa (2-Phosphonomethyl-Pentanedioic Acid)
  21. 2jbk - Membrane-Bound Glutamate Carboxypeptidase II (Gcpii) in Complex With Quisqualic Acid (Quisqualate, Alpha-Amino-3,5- Dioxo-1,2,4-Oxadiazolidine-2-Propanoic Acid)
  22. 2jcw - Reduced Bridge-Broken Yeast Cu/Zn Superoxide Dismutase Room Temperature (298K) Structure
  23. 2jd8 - Crystal Structure of The Zn-Soaked Ferritin From the Hyperthermophilic Archaeal Anaerobe Pyrococcus Furiosus
  24. 2jew - Crystal Structure of ( (2S)-5-Amino-2-((1-N-Propyl-1H- Imidazol-4-Yl)Methyl)Pentanoic Acid) UK396,082 A Tafia Inhibitor, Bound to Activated Porcine Pancreatic Carboxypeptidaseb
  25. 2jg4 - Substrate-Free Ide Structure in Its Closed Conformation
  26. 2jg6 - Crystal Structure of A 3-Methyladenine Dna Glycosylase I From Staphylococcus Aureus
  27. 2jgo - Stucture of the Arsenated De Novo Designed Peptide Coil Ser L9C
  28. 2jhg - Structural Evidence For A Ligand Coordination Switch in Liver Alcohol Dehydrogenase
  29. 2jho - Cyanomet Sperm Whale Myoglobin At 1.4A Resolution
  30. 2jig - Crystal Structure of Chlamydomonas Reinhardtii Prolyl-4 Hydroxylase Type I Complexed With Zinc and Pyridine-2,4- Dicarboxylate
  31. 2jih - Crystal Structure of Human Adamts-1 Catalytic Domain and Cysteine-Rich Domain (Complex-Form)
  32. 2jjl - Structure of Avian Reovirus Sigma C 117-326, P321 Crystal Form
  33. 2jjz - Crystal Structure of Human IBA2, Orthorhombic Crystal Form
  34. 2jk7 - Xiap BIR3 Bound to A Smac Mimetic
  35. 2jks - Crystal Structure of The the Bradyzoite Specific Antigen BSR4 From Toxoplasma Gondii.
  36. 2jl0 - Structure Of the N90S Mutant of Nitrite Reductase From Alcaligenes Xylosoxidans
  37. 2jl3 - Crystal Structure Of the Cu Metallated H254F Mutant of Alcaligenes Xylosoxidans Cu Nitrite Reductase
  38. 2jlp - Crystal Structure of Human Extracellular Copper-Zinc Superoxide Dismutase.
  39. 2jm1 - Structures and Chemical Shift Assignments For The Add Domain of the Atrx Protein
  40. 2jm3 - Solution Structure of the Thap Domain From C. Elegans C- Terminal Binding Protein (Ctbp)
  41. 2jmd - Solution Structure Of the Ring Domain of Human TRAF6
  42. 2jmi - uc(Nmr) Solution Structure Of Phd Finger Fragment of Yeast YNG1 Protein in Free State
  43. 2jmj - uc(Nmr) Solution Structure of The Phd Domain From the Yeast YNG1 Protein in Complex With H3(1-9)K4ME3 Peptide
  44. 2jmo - Ibr Domain of Human Parkin
  45. 2jne - uc(Nmr) Structure of E.Coli Yfgj Modelled With Two Zn+2 Bound. Northeast Structural Genomics Consortium Target ER317.
  46. 2jnp - Solution Structure Of Matrix Metalloproteinase 3 (Mmp-3) in the Presence of N-Isobutyl-N-[4- Methoxyphenylsulfonyl]Glycyl Hydroxamic Acid (Nngh)
  47. 2jox - Embryonic Neural Inducing Factor Churchill Is Not A Dna- Binding Zinc Finger Protein: Solution Structure Reveals A Solvent-Exposed Beta-Sheet and Zinc Binuclear Cluster
  48. 2jp9 - Structure of the Wilms Tumor Suppressor Protein Zinc Finger Domain Bound to Dna
  49. 2jpa - Structure of the Wilms Tumor Suppressor Protein Zinc Finger Domain Bound to Dna
  50. 2jq5 - Solution Structure of RPA3114, A Sec-C Motif Containing Protein From Rhodopseudomonas Palustris; Northeast Structural Genomics Consortium Target RPT5 / Ontario Center For Structural Proteomics Target RP3097


Acknowledgement

We would like to acknowledge that these pictures of PDB structures of Zinc coordination spheres were produced with valuable advice from our colleagues from http://3dpdb.com.
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