Zinc in PDB 2paj: Crystal Structure of An Amidohydrolase From An Environmental Sample of Sargasso Sea

The structure of Crystal Structure of An Amidohydrolase From An Environmental Sample of Sargasso Sea, PDB code: 2paj was solved by R.Agarwal, S.K.Burley, S.Swaminathan, New York Sgx Research Center Forstructural Genomics (Nysgxrc), with X-Ray Crystallography technique. A brief refinement statistics is given in the table below:

Resolution Low / High (Å)	44.44 / 2.70
Space group	P 31 2 1
Cell size a, b, c (Å), α, β, γ (°)	88.872, 88.872, 161.867, 90.00, 90.00, 120.00
R / Rfree (%)	23.4 / 28.6

The binding sites of Zinc atom in the Crystal Structure of An Amidohydrolase From An Environmental Sample of Sargasso Sea (pdb code 2paj). This binding sites where shown within 5.0 Angstroms radius around Zinc atom.
In total only one binding site of Zinc was determined in the Crystal Structure of An Amidohydrolase From An Environmental Sample of Sargasso Sea, PDB code: 2paj:

Zinc binding site 1 out of 1 in the Crystal Structure of An Amidohydrolase From An Environmental Sample of Sargasso Sea


Mono view


Stereo pair view

A full contact list of Zinc with other atoms in the Zn binding site number 1 of Crystal Structure of An Amidohydrolase From An Environmental Sample of Sargasso Sea within 5.0Å range: probe atom residue distance (Å) B Occ A:Zn493 b:46.9 occ:1.00 OD1 A:ASP336 2.0 63.3 1.0 NE2 A:HIS78 2.1 48.1 1.0 NE2 A:HIS248 2.1 54.8 1.0 NE2 A:HIS76 2.3 43.4 1.0 O A:HOH551 2.7 49.9 1.0 CE1 A:HIS248 2.7 53.7 1.0 NE2 A:HIS285 2.9 77.3 1.0 CD2 A:HIS78 2.9 47.6 1.0 CG A:ASP336 2.9 61.0 1.0 CE1 A:HIS78 3.1 45.5 1.0 CE1 A:HIS285 3.2 75.7 1.0 CE1 A:HIS76 3.2 44.7 1.0 CD2 A:HIS76 3.3 43.4 1.0 CD2 A:HIS248 3.3 55.1 1.0 CB A:ASP336 3.4 60.8 1.0 CD2 A:HIS285 3.7 76.4 1.0 OD2 A:ASP336 3.9 59.9 1.0 ND1 A:HIS248 3.9 53.0 1.0 CG A:HIS78 4.1 46.1 1.0 ND1 A:HIS285 4.1 76.2 1.0 ND1 A:HIS78 4.1 45.7 1.0 CG A:HIS248 4.2 54.7 1.0 ND1 A:HIS76 4.3 45.0 1.0 CG A:HIS285 4.4 74.9 1.0 CG A:HIS76 4.4 42.6 1.0 CA A:ASP336 4.9 59.5 1.0

R.S.Hall, R.Agarwal, D.Hitchcock, J.M.Sauder, S.K.Burley, S.Swaminathan, F.M.Raushel. Discovery and Structure Determination of the Orphan Enzyme Isoxanthopterin Deaminase. Biochemistry V. 49 4374 2010.
ISSN: ISSN 0006-2960
PubMed: 20415463
DOI: 10.1021/BI100252S