Zinc in PDB 2ke1: Molecular Basis of Non-Modified Histone H3 Tail Recognition By the First Phd Finger of Autoimmune Regulator

The binding sites of Zinc atom in the Molecular Basis of Non-Modified Histone H3 Tail Recognition By the First Phd Finger of Autoimmune Regulator (pdb code 2ke1). This binding sites where shown within 5.0 Angstroms radius around Zinc atom.
In total 2 binding sites of Zinc where determined in the Molecular Basis of Non-Modified Histone H3 Tail Recognition By the First Phd Finger of Autoimmune Regulator, PDB code: 2ke1:
Jump to Zinc binding site number: 1; 2;

Zinc binding site 1 out of 2 in the Molecular Basis of Non-Modified Histone H3 Tail Recognition By the First Phd Finger of Autoimmune Regulator


Mono view


Stereo pair view

A full contact list of Zinc with other atoms in the Zn binding site number 1 of Molecular Basis of Non-Modified Histone H3 Tail Recognition By the First Phd Finger of Autoimmune Regulator within 5.0Å range: probe atom residue distance (Å) B Occ A:Zn355 b:0.2 occ:1.00 HB A:VAL301 2.2 0.2 1.0 ND1 A:HIS319 2.5 0.2 1.0 SG A:CYS302 2.5 0.3 1.0 SG A:CYS299 2.5 0.2 1.0 SG A:CYS322 2.6 0.2 1.0 HB2 A:HIS319 2.6 0.1 1.0 H A:CYS302 2.8 0.2 1.0 HB2 A:CYS322 2.9 0.2 1.0 HB3 A:CYS322 3.0 0.2 1.0 CB A:CYS322 3.0 0.2 1.0 HB3 A:CYS299 3.1 0.2 1.0 CB A:VAL301 3.2 0.2 1.0 H A:HIS319 3.3 0.1 1.0 CB A:CYS299 3.4 0.2 1.0 CG A:HIS319 3.4 0.1 1.0 CB A:HIS319 3.5 0.1 1.0 HG11 A:VAL301 3.6 1.0 1.0 CE1 A:HIS319 3.6 0.2 1.0 N A:CYS302 3.6 0.2 1.0 HG13 A:VAL301 3.6 1.0 1.0 HB2 A:CYS299 3.6 0.2 1.0 CG1 A:VAL301 3.7 0.2 1.0 HE1 A:HIS319 3.8 0.2 1.0 CB A:CYS302 3.9 0.3 1.0 HG22 A:VAL301 3.9 1.0 1.0 H A:VAL301 3.9 0.2 1.0 CG2 A:VAL301 4.0 0.2 1.0 HB3 A:CYS302 4.1 0.4 1.0 N A:HIS319 4.1 0.1 1.0 HG23 A:VAL301 4.2 1.0 1.0 CA A:VAL301 4.2 0.2 1.0 HB3 A:HIS319 4.2 0.2 1.0 C A:VAL301 4.3 0.2 1.0 HB3 A:ASP304 4.3 0.6 1.0 CA A:CYS302 4.3 0.3 1.0 CA A:HIS319 4.4 0.1 1.0 N A:VAL301 4.4 0.2 1.0 H A:ASP304 4.5 0.2 1.0 CA A:CYS322 4.5 0.2 1.0 CD2 A:HIS319 4.6 0.2 1.0 NE2 A:HIS319 4.7 0.2 1.0 HG12 A:VAL301 4.8 1.1 1.0 HB2 A:CYS302 4.8 0.4 1.0 CA A:CYS299 4.8 0.2 1.0 H A:ARG303 4.8 0.3 1.0 HA A:PHE318 4.8 0.1 1.0 H A:CYS322 4.8 0.2 1.0 HA A:CYS322 4.9 0.2 1.0

Zinc binding site 2 out of 2 in the Molecular Basis of Non-Modified Histone H3 Tail Recognition By the First Phd Finger of Autoimmune Regulator


Mono view


Stereo pair view

A full contact list of Zinc with other atoms in the Zn binding site number 2 of Molecular Basis of Non-Modified Histone H3 Tail Recognition By the First Phd Finger of Autoimmune Regulator within 5.0Å range: probe atom residue distance (Å) B Occ A:Zn356 b:0.7 occ:1.00 HB2 A:CYS314 1.7 1.2 1.0 SG A:CYS340 2.4 0.6 1.0 CB A:CYS314 2.4 0.3 1.0 SG A:CYS337 2.5 0.6 1.0 SG A:CYS311 2.5 0.2 1.0 SG A:CYS314 2.5 1.3 1.0 H A:CYS337 2.8 0.2 1.0 HB3 A:CYS314 3.1 0.9 1.0 HB3 A:CYS311 3.1 0.2 1.0 CB A:CYS311 3.2 0.2 1.0 HB2 A:CYS311 3.3 0.2 1.0 H A:CYS314 3.4 0.3 1.0 CA A:CYS314 3.6 0.2 1.0 HB3 A:CYS337 3.6 0.5 1.0 N A:CYS314 3.6 0.2 1.0 CB A:CYS337 3.7 0.4 1.0 N A:CYS337 3.7 0.2 1.0 HB2 A:CYS340 3.8 0.4 1.0 CB A:CYS340 3.9 0.5 1.0 HA A:ARG336 4.0 0.2 1.0 H A:CYS340 4.2 0.5 1.0 CA A:CYS337 4.3 0.3 1.0 HA A:CYS314 4.3 0.3 1.0 O A:CYS314 4.4 0.2 1.0 C A:CYS314 4.4 0.2 1.0 HB3 A:CYS340 4.5 0.5 1.0 C A:GLY313 4.5 0.3 1.0 HB2 A:CYS337 4.6 0.5 1.0 HB3 A:ARG336 4.7 0.3 1.0 CA A:CYS311 4.7 0.1 1.0 C A:ARG336 4.7 0.2 1.0 H A:GLY313 4.7 0.3 1.0 CA A:ARG336 4.8 0.2 1.0 HB2 A:ARG316 4.8 0.3 1.0 HG2 A:ARG336 4.8 0.5 1.0 HB3 A:SER339 4.8 1.2 1.0 N A:CYS340 4.8 0.5 1.0 CA A:CYS340 4.9 0.5 1.0 HE1 A:PHE318 5.0 0.2 1.0

F.Chignola, M.Gaetani, A.Rebane, T.Org, L.Mollica, C.Zucchelli, A.Spitaleri, V.Mannella, P.Peterson, G.Musco. The Solution Structure of the First Phd Finger of Autoimmune Regulator in Complex with Non-Modified Histone H3 Tail Reveals the Antagonistic Role of H3R2 Methylation Nucleic Acids Res. V. 37 2951 2009.
ISSN: ISSN 0305-1048
PubMed: 19293276
DOI: 10.1093/NAR/GKP166