Zinc in PDB 2ctd: Solution Structure of Two Zf-C2H2 Domains From Human Zinc Finger Protein 512

The binding sites of Zinc atom in the Solution Structure of Two Zf-C2H2 Domains From Human Zinc Finger Protein 512 (pdb code 2ctd). This binding sites where shown within 5.0 Angstroms radius around Zinc atom.
In total 2 binding sites of Zinc where determined in the Solution Structure of Two Zf-C2H2 Domains From Human Zinc Finger Protein 512, PDB code: 2ctd:
Jump to Zinc binding site number: 1; 2;

Zinc binding site 1 out of 2 in the Solution Structure of Two Zf-C2H2 Domains From Human Zinc Finger Protein 512


Mono view


Stereo pair view

A full contact list of Zinc with other atoms in the Zn binding site number 1 of Solution Structure of Two Zf-C2H2 Domains From Human Zinc Finger Protein 512 within 5.0Å range: probe atom residue distance (Å) B Occ A:Zn201 b:0.0 occ:1.00 SG A:CYS40 2.3 0.0 1.0 SG A:CYS58 2.3 0.0 1.0 NE2 A:HIS54 2.4 0.0 1.0 SG A:CYS37 2.4 0.0 1.0 HD2 A:HIS54 2.7 0.0 1.0 CD2 A:HIS54 2.9 0.0 1.0 H A:CYS40 2.9 0.0 1.0 HB A:THR39 3.1 0.0 1.0 HB3 A:CYS37 3.2 0.0 1.0 CB A:CYS37 3.2 0.0 1.0 HB3 A:CYS58 3.3 0.0 1.0 CB A:CYS58 3.3 0.0 1.0 HB2 A:CYS37 3.4 0.0 1.0 HB3 A:CYS40 3.4 0.0 1.0 HB2 A:CYS58 3.5 0.0 1.0 CB A:CYS40 3.5 0.0 1.0 CE1 A:HIS54 3.6 0.0 1.0 N A:CYS40 3.8 0.0 1.0 HE1 A:HIS54 4.1 0.0 1.0 CB A:THR39 4.2 0.0 1.0 CG A:HIS54 4.2 0.0 1.0 HG21 A:VAL43 4.2 0.0 1.0 H A:GLN41 4.2 0.0 1.0 HG23 A:THR39 4.2 0.0 1.0 CA A:CYS40 4.3 0.0 1.0 HB2 A:CYS40 4.4 0.0 1.0 H A:THR39 4.4 0.0 1.0 HA A:MET55 4.4 0.0 1.0 ND1 A:HIS54 4.5 0.0 1.0 HG1 A:THR39 4.5 0.0 1.0 CA A:CYS37 4.7 0.0 1.0 CA A:CYS58 4.8 0.0 1.0 C A:THR39 4.8 0.0 1.0 CG2 A:THR39 4.8 0.0 1.0 OG1 A:THR39 4.9 0.0 1.0 CA A:THR39 4.9 0.0 1.0 HG23 A:VAL43 4.9 0.0 1.0 CG2 A:VAL43 5.0 0.0 1.0 N A:GLN41 5.0 0.0 1.0

Zinc binding site 2 out of 2 in the Solution Structure of Two Zf-C2H2 Domains From Human Zinc Finger Protein 512


Mono view


Stereo pair view

A full contact list of Zinc with other atoms in the Zn binding site number 2 of Solution Structure of Two Zf-C2H2 Domains From Human Zinc Finger Protein 512 within 5.0Å range: probe atom residue distance (Å) B Occ A:Zn401 b:0.0 occ:1.00 SG A:CYS68 2.3 0.0 1.0 NE2 A:HIS86 2.3 0.0 1.0 SG A:CYS65 2.3 0.0 1.0 NE2 A:HIS81 2.4 0.0 1.0 H A:CYS68 2.6 0.0 1.0 HB2 A:HIS67 3.0 0.0 1.0 HG21 A:VAL82 3.0 0.0 1.0 HD2 A:HIS86 3.0 0.0 1.0 CD2 A:HIS86 3.0 0.0 1.0 CD2 A:HIS81 3.2 0.0 1.0 H A:GLY69 3.2 0.0 1.0 HB3 A:CYS65 3.2 0.0 1.0 HD2 A:HIS81 3.2 0.0 1.0 CB A:CYS65 3.3 0.0 1.0 CE1 A:HIS81 3.4 0.0 1.0 N A:CYS68 3.4 0.0 1.0 H A:LYS70 3.4 0.0 1.0 HB2 A:CYS65 3.4 0.0 1.0 CE1 A:HIS86 3.5 0.0 1.0 CB A:CYS68 3.5 0.0 1.0 HB2 A:LYS70 3.6 0.0 1.0 HB3 A:CYS68 3.6 0.0 1.0 HE1 A:HIS81 3.7 0.0 1.0 HE1 A:HIS86 3.9 0.0 1.0 CB A:HIS67 3.9 0.0 1.0 HB3 A:HIS67 4.0 0.0 1.0 CA A:CYS68 4.0 0.0 1.0 CG2 A:VAL82 4.0 0.0 1.0 N A:GLY69 4.1 0.0 1.0 HG23 A:VAL82 4.1 0.0 1.0 HA A:VAL82 4.2 0.0 1.0 HB3 A:LYS70 4.3 0.0 1.0 CG A:HIS86 4.3 0.0 1.0 CG A:HIS81 4.3 0.0 1.0 H A:HIS67 4.4 0.0 1.0 CB A:LYS70 4.4 0.0 1.0 N A:LYS70 4.4 0.0 1.0 HB2 A:CYS68 4.4 0.0 1.0 C A:HIS67 4.4 0.0 1.0 ND1 A:HIS81 4.4 0.0 1.0 ND1 A:HIS86 4.5 0.0 1.0 HG22 A:VAL82 4.5 0.0 1.0 CA A:HIS67 4.5 0.0 1.0 HE2 A:LYS70 4.6 0.0 1.0 C A:CYS68 4.6 0.0 1.0 N A:HIS67 4.6 0.0 1.0 CA A:CYS65 4.7 0.0 1.0 H A:HIS66 4.9 0.0 1.0 HG12 A:VAL82 4.9 0.0 1.0 HA A:CYS68 5.0 0.0 1.0

T.Tomizawa, T.Kigawa, S.Koshiba, M.Inoue, S.Yokoyama. Solution Structure of Two Zf-C2H2 Domains From Human Zinc Finger Protein 512 To Be Published.