Chemical elements
  Zinc
    Isotopes
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    Physical Properties
    Chemical Properties
    PDB 12ca-1ai0
    PDB 1aiy-1b6z
    PDB 1b71-1bs8
    PDB 1bsk-1cao
    PDB 1caq-1ctt
    PDB 1ctu-1de6
    PDB 1def-1dy0
    PDB 1dy1-1ed6
    PDB 1ed8-1exk
    PDB 1eyf-1fj9
    PDB 1fjg-1g0e
    PDB 1g0f-1gkq
    PDB 1gkr-1ha5
    PDB 1hbm-1hso
    PDB 1hsz-1i6v
    PDB 1i73-1im5
    PDB 1iml-1jcv
    PDB 1jcz-1jy8
    PDB 1jyb-1kh4
    PDB 1kh5-1kys
    PDB 1kzo-1llm
    PDB 1llu-1m7j
    PDB 1m9j-1mwo
    PDB 1mwq-1ndv
    PDB 1ndw-1nyq
    PDB 1nyr-1os4
    PDB 1os9-1p9w
    PDB 1paa-1pud
    PDB 1pv8-1q9l
    PDB 1q9m-1qv6
    PDB 1qv7-1r6o
    PDB 1r79-1ro9
    PDB 1ror-1sfo
    PDB 1sg0-1t3k
    PDB 1t4k-1tkh
    PDB 1tkj-1u0l
    PDB 1u10-1ums
    PDB 1umt-1v67
    PDB 1v6g-1vrq
    PDB 1vs0-1wew
    PDB 1wfe-1wwf
    PDB 1wwg-1xb1
    PDB 1xb8-1xpz
    PDB 1xq0-1y5w
    PDB 1y5x-1ylk
    PDB 1ylo-1z8r
    PDB 1z93-1zkx
    PDB 1zl6-258l
    PDB 2a03-2afo
    PDB 2afs-2atq
    PDB 2au3-2bfz
    PDB 2bg2-2c3a
      2bg2
      2bg6
      2bg7
      2bg8
      2bga
      2bgn
      2bh3
      2bh7
      2bhb
      2bib
      2bim
      2bin
      2bio
      2bip
      2biq
      2bjr
      2bl6
      2bmi
      2bn7
      2bnm
      2bnn
      2bno
      2bo0
      2bo9
      2boa
      2boq
      2bp0
      2bp8
      2bq8
      2br6
      2bsf
      2bte
      2btn
      2bx2
      2bx9
      2byo
      2byt
      2bz0
      2bz1
      2bzs
      2c0b
      2c1c
      2c1d
      2c1g
      2c1i
      2c20
      2c2f
      2c2u
      2c36
      2c3a
    PDB 2c4r-2cij
    PDB 2cim-2czr
    PDB 2d0w-2djw
    PDB 2dkc-2e1b
    PDB 2e1s-2eer
    PDB 2eex-2em4
    PDB 2em5-2eoj
    PDB 2eok-2erq
    PDB 2esf-2fa7
    PDB 2fac-2fpx
    PDB 2fqp-2g84
    PDB 2g87-2gvf
    PDB 2gvi-2han
    PDB 2hap-2huc
    PDB 2hue-2imc
    PDB 2imr-2j65
    PDB 2j6a-2jq5
    PDB 2jr7-2kfn
    PDB 2kft-2l75
    PDB 2lgv-2nx9
    PDB 2nxa-2oc8
    PDB 2occ-2osm
    PDB 2oso-2p53
    PDB 2p57-2pow
    PDB 2ppb-2q8j
    PDB 2qa1-2qp6
    PDB 2qpj-2r71
    PDB 2r74-2sod
    PDB 2srt-2v86
    PDB 2v87-2vp7
    PDB 2vpb-2vyo
    PDB 2vz5-2wey
    PDB 2wfq-2wx0
    PDB 2wx1-2xam
    PDB 2xan-2xr9
    PDB 2xrg-2ytd
    PDB 2yte-2z30
    PDB 2z3g-2zet
    PDB 2zh0-3a32
    PDB 3a36-3aoi
    PDB 3at1-3bk1
    PDB 3bk2-3byr
    PDB 3byw-3cia
    PDB 3ciz-3d08
    PDB 3d09-3dbu
    PDB 3dc3-3dp6
    PDB 3dpe-3e1w
    PDB 3e1z-3ebh
    PDB 3ebi-3epk
    PDB 3epl-3f28
    PDB 3f2b-3fhe
    PDB 3fhp-3ful
    PDB 3fum-3g9y
    PDB 3ga3-3gpu
    PDB 3gpx-3h2w
    PDB 3h3e-3hfy
    PDB 3hgz-3hsn
    PDB 3hso-3i8v
    PDB 3i9b-3ij6
    PDB 3ijf-3ixe
    PDB 3iz0-3k34
    PDB 3k35-3kiy
    PDB 3kj1-3kvt
    PDB 3kwa-3lat
    PDB 3lcn-3lrr
    PDB 3ls1-3m1n
    PDB 3m1v-3mek
    PDB 3men-3mru
    PDB 3ms0-3n63
    PDB 3n64-3nin
    PDB 3nis-3ny2
    PDB 3ny3-3ohc
    PDB 3ohd-3oyl
    PDB 3oym-3pih
    PDB 3pki-3r0d
    PDB 3rj7-3t74
    PDB 3t87-3u9g
    PDB 3ua7-3v24
    PDB 3v25-4agl
    PDB 4agm-4dih
    PDB 4dii-4efs
    PDB 4eg2-4fc8
    PDB 4fgm-6tli
    PDB 6tmn-9nse

Zinc in PDB, part 52 (2551-2600), PDB files 2bg2 - 2c3a






Experimental structures of coordination spheres of Zinc (Zn) in bioorganic molecules from X-Ray and NMR experiments. Coordination spheres were calculated with 5.0 Angstroms radius around Zinc atoms.
PDB files 2551-2600 (2bg2 - 2c3a):
  1. 2bg2 - Bacillus Cereus Metallo-Beta-Lactamase (Bcii) Arg (121) Cys Mutant. Solved At PH4.5 Using 20MM ZNSO4 in the Buffer. 1MM Dtt and 1MM Tcep-Hcl Were Used As Reducing Agents. CYS221 Is Reduced.
  2. 2bg6 - Bacillus Cereus Metallo-Beta-Lactamase (Bcii) Arg (121) Cys Mutant. Solved At PH5 Using 20 Micromolar ZNSO4 in the Buffer. 1MM Dtt Was Used As A Reducing Agent. CYS221 Is Oxidized.
  3. 2bg7 - Bacillus Cereus Metallo-Beta-Lactamase (Bcii) Arg (121) Cys Mutant. Solved At PH4.5 Using 20 Micromolar ZNSO4 in the Buffer. 1MM Dtt Was Used As A Reducing Agent. CYS221 Is Oxidized.
  4. 2bg8 - Bacillus Cereus Metallo-Beta-Lactamase (Bcii) Arg (121) Cys Mutant. Solved At PH4.5 Using 20 Micromolar ZNSO4 in the Buffer. 1MM Dtt and 1MM Tcep-Hcl Were Used As Reducing Agents.
  5. 2bga - Bacillus Cereus Metallo-Beta-Lactamase (Bcii) Arg (121) Cys Mutant. Solved At PH7 Using 20 Micromolar ZNSO4 in the Buffer. 1MM Dtt Was Used As A Reducing Agent. CYS221 Is Oxidized.
  6. 2bgn - Hiv-1 Tat Protein Derived N-Terminal Nonapeptide TRP2-Tat (1-9) Bound to the Active Site of Dipeptidyl Peptidase IV (CD26)
  7. 2bh3 - Zn Substituted E.Coli Aminopeptidase P in Complex With Product
  8. 2bh7 - Crystal Structure Of A Semet Derivative of Amid At 2.2 Angstroms
  9. 2bhb - Zn Substituted E. Coli Aminopeptidase P
  10. 2bib - Crystal Structure of the Complete Modular Teichioic Acid Phosphorylcholine Esterase Pce (Cbpe) From Streptococcus Pneumoniae
  11. 2bim - Human P53 Core Domain Mutant M133L-V203A-N239Y-N268D-R273H
  12. 2bin - Human P53 Core Domain Mutant M133L-H168R-V203A-N239Y-N268D
  13. 2bio - Human P53 Core Domain Mutant M133L-V203A-N239Y-R249S-N268D
  14. 2bip - Human P53 Core Domain Mutant M133L-H168R-V203A-N239Y-R249S- N268D
  15. 2biq - Human P53 Core Domain Mutant T123A-M133L-H168R-V203A-N239Y- R249S-N268D
  16. 2bjr - Crystal Structure of the Nematode Sperm Cell Motility Protein MFP2B
  17. 2bl6 - Solution Structure Of the Zn Complex of Eiav NCP11(22-58) Peptide, Including Two Cchc Zn-Binding Motifs.
  18. 2bmi - Metallo-Beta-Lactamase
  19. 2bn7 - Mn Substituted E. Coli Aminopeptidase P in Complex With Product and Zn
  20. 2bnm - The Structure of Hydroxypropylphosphonic Acid Epoxidase From S. Wedmorenis.
  21. 2bnn - The Structure of Hydroxypropylphosphonic Acid Epoxidase From S. Wedmorenis in Complex With Fosfomycin
  22. 2bno - The Structure of Hydroxypropylphosphonic Acid Epoxidase From S. Wedmorenis.
  23. 2bo0 - Crystal Structure Of the C130A Mutant of Nitrite Reductase From Alcaligenes Xylosoxidans
  24. 2bo9 - Human Carboxypeptidase A4 in Complex With Human Latexin.
  25. 2boa - Human Procarboxypeptidase A4.
  26. 2boq - Crystal Structure of Versatile Peroxidase
  27. 2bp0 - M144L Mutant of Nitrite Reductase From Alcaligenes Xylosoxidans
  28. 2bp8 - M144Q Structure of Nitrite Reductase From Alcaligenes Xylosoxidans
  29. 2bq8 - Crystal Structure Of Human Purple Acid Phosphatase With An Inhibitory Conformation of the Repression Loop
  30. 2br6 - Crystal Structure of Quorum-Quenching N-Acyl Homoserine Lactone Lactonase
  31. 2bsf - Structure Of the C-Terminal Receptor-Binding Domain of Avian Reovirus Fibre Sigmac, Zn Crystal Form.
  32. 2bte - Thermus Thermophilus Leucyl-Trna Synthetase Complexed With With A Trnaleu Transcript in the Post-Editing Conformation and A Post-Transfer Editing Substrate Analogue
  33. 2btn - Crystal Structure and Catalytic Mechanism of the Quorum- Quenching N-Acyl Homoserine Lactone Hydrolase
  34. 2bx2 - Catalytic Domain of E. Coli Rnase E
  35. 2bx9 - Crystal Structure Of B.Subtilis Anti-Trap Protein, An Antagonist of Trap-Rna Interactions
  36. 2byo - Crystal Structure of Mycobacterium Tuberculosis Lipoprotein Lppx (RV2945C)
  37. 2byt - Thermus Thermophilus Leucyl-Trna Synthetase Complexed With A Trnaleu Transcript in the Post-Editing Conformation
  38. 2bz0 - Crystal Structure of E. Coli Gtp Cyclohydrolase II in Complex With Gtp Analogue, Gmpcpp, and Zinc
  39. 2bz1 - Crystal Structure of Apo E. Coli Gtp Cyclohydrolase II
  40. 2bzs - Binding Of Anti-Cancer Prodrug CB1954 to The Activating Enzyme NQO2 Revealed By the Crystal Structure of Their Complex.
  41. 2c0b - Catalytic Domain of E. Coli Rnase E in Complex With 13-Mer Rna
  42. 2c1c - Structural Basis Of the Resistance of An Insect Carboxypeptidase to Plant Protease Inhibitors
  43. 2c1d - Crystal Structure of Soxxa From P. Pantotrophus
  44. 2c1g - Structure of Streptococcus Pneumoniae Peptidoglycan Deacetylase (Sppgda)
  45. 2c1i - Structure of Streptococcus Pnemoniae Peptidoglycan Deacetylase (Sppgda) D 275 N Mutant.
  46. 2c20 - Crystal Structure of Udp-Glucose 4-Epimerase
  47. 2c2f - Dps From Deinococcus Radiodurans
  48. 2c2u - Dps From Deinococcus Radiodurans
  49. 2c36 - Structure Of Unliganded Hsv Gd Reveals A Mechanism For Receptor-Mediated Activation of Virus Entry
  50. 2c3a - Structure Of Unliganded Hsv Gd Reveals A Mechanism For Receptor-Mediated Activation of Virus Entry


Acknowledgement

We would like to acknowledge that these pictures of PDB structures of Zinc coordination spheres were produced with valuable advice from our colleagues from http://3dpdb.com.
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