Chemical elements
  Zinc
    Isotopes
    Energy
    Production
    Application
    Physical Properties
    Chemical Properties
    PDB 12ca-1ai0
    PDB 1aiy-1b6z
    PDB 1b71-1bs8
    PDB 1bsk-1cao
    PDB 1caq-1ctt
    PDB 1ctu-1de6
    PDB 1def-1dy0
    PDB 1dy1-1ed6
    PDB 1ed8-1exk
    PDB 1eyf-1fj9
    PDB 1fjg-1g0e
    PDB 1g0f-1gkq
    PDB 1gkr-1ha5
    PDB 1hbm-1hso
    PDB 1hsz-1i6v
    PDB 1i73-1im5
    PDB 1iml-1jcv
    PDB 1jcz-1jy8
    PDB 1jyb-1kh4
    PDB 1kh5-1kys
    PDB 1kzo-1llm
    PDB 1llu-1m7j
    PDB 1m9j-1mwo
    PDB 1mwq-1ndv
    PDB 1ndw-1nyq
    PDB 1nyr-1os4
    PDB 1os9-1p9w
    PDB 1paa-1pud
    PDB 1pv8-1q9l
    PDB 1q9m-1qv6
    PDB 1qv7-1r6o
    PDB 1r79-1ro9
    PDB 1ror-1sfo
    PDB 1sg0-1t3k
    PDB 1t4k-1tkh
    PDB 1tkj-1u0l
    PDB 1u10-1ums
    PDB 1umt-1v67
    PDB 1v6g-1vrq
    PDB 1vs0-1wew
    PDB 1wfe-1wwf
    PDB 1wwg-1xb1
    PDB 1xb8-1xpz
    PDB 1xq0-1y5w
    PDB 1y5x-1ylk
    PDB 1ylo-1z8r
    PDB 1z93-1zkx
    PDB 1zl6-258l
    PDB 2a03-2afo
    PDB 2afs-2atq
    PDB 2au3-2bfz
      2au3
      2aus
      2avu
      2aw1
      2ax2
      2axr
      2ayd
      2ayi
      2ayj
      2ayk
      2ays
      2az4
      2azh
      2b0o
      2b0p
      2b0z
      2b10
      2b11
      2b12
      2b13
      2b3j
      2b3x
      2b3z
      2b44
      2b4y
      2b5l
      2b5w
      2b63
      2b65
      2b83
      2b8k
      2b8o
      2b8t
      2b9d
      2ba1
      2bai
      2bb0
      2bbf
      2bc2
      2bcn
      2bco
      2bdh
      2be5
      2be7
      2be9
      2bed
      2bf9
      2bfk
      2bfl
      2bfz
    PDB 2bg2-2c3a
    PDB 2c4r-2cij
    PDB 2cim-2czr
    PDB 2d0w-2djw
    PDB 2dkc-2e1b
    PDB 2e1s-2eer
    PDB 2eex-2em4
    PDB 2em5-2eoj
    PDB 2eok-2erq
    PDB 2esf-2fa7
    PDB 2fac-2fpx
    PDB 2fqp-2g84
    PDB 2g87-2gvf
    PDB 2gvi-2han
    PDB 2hap-2huc
    PDB 2hue-2imc
    PDB 2imr-2j65
    PDB 2j6a-2jq5
    PDB 2jr7-2kfn
    PDB 2kft-2l75
    PDB 2lgv-2nx9
    PDB 2nxa-2oc8
    PDB 2occ-2osm
    PDB 2oso-2p53
    PDB 2p57-2pow
    PDB 2ppb-2q8j
    PDB 2qa1-2qp6
    PDB 2qpj-2r71
    PDB 2r74-2sod
    PDB 2srt-2v86
    PDB 2v87-2vp7
    PDB 2vpb-2vyo
    PDB 2vz5-2wey
    PDB 2wfq-2wx0
    PDB 2wx1-2xam
    PDB 2xan-2xr9
    PDB 2xrg-2ytd
    PDB 2yte-2z30
    PDB 2z3g-2zet
    PDB 2zh0-3a32
    PDB 3a36-3aoi
    PDB 3at1-3bk1
    PDB 3bk2-3byr
    PDB 3byw-3cia
    PDB 3ciz-3d08
    PDB 3d09-3dbu
    PDB 3dc3-3dp6
    PDB 3dpe-3e1w
    PDB 3e1z-3ebh
    PDB 3ebi-3epk
    PDB 3epl-3f28
    PDB 3f2b-3fhe
    PDB 3fhp-3ful
    PDB 3fum-3g9y
    PDB 3ga3-3gpu
    PDB 3gpx-3h2w
    PDB 3h3e-3hfy
    PDB 3hgz-3hsn
    PDB 3hso-3i8v
    PDB 3i9b-3ij6
    PDB 3ijf-3ixe
    PDB 3iz0-3k34
    PDB 3k35-3kiy
    PDB 3kj1-3kvt
    PDB 3kwa-3lat
    PDB 3lcn-3lrr
    PDB 3ls1-3m1n
    PDB 3m1v-3mek
    PDB 3men-3mru
    PDB 3ms0-3n63
    PDB 3n64-3nin
    PDB 3nis-3ny2
    PDB 3ny3-3ohc
    PDB 3ohd-3oyl
    PDB 3oym-3pih
    PDB 3pki-3r0d
    PDB 3rj7-3t74
    PDB 3t87-3u9g
    PDB 3ua7-3v24
    PDB 3v25-4agl
    PDB 4agm-4dih
    PDB 4dii-4efs
    PDB 4eg2-4fc8
    PDB 4fgm-6tli
    PDB 6tmn-9nse

Zinc in PDB, part 51 (2501-2550), PDB files 2au3 - 2bfz






Experimental structures of coordination spheres of Zinc (Zn) in bioorganic molecules from X-Ray and NMR experiments. Coordination spheres were calculated with 5.0 Angstroms radius around Zinc atoms.
PDB files 2501-2550 (2au3 - 2bfz):
  1. 2au3 - Crystal Structure of the Aquifex Aeolicus Primase (Zinc Binding and Rna Polymerase Domains)
  2. 2aus - Crystal Structure of the Archaeal Box H/Aca Srnp NOP10-CBF5 Complex
  3. 2avu - Structure Of the Escherichia Coli Flhdc Complex, A Prokaryotic Heteromeric Regulator of Transcription
  4. 2aw1 - Carbonic Anhydrase Inhibitors: Valdecoxib Binds To A Different Active Site Region of The Human Isoform II As Compared to the Structurally Related Cyclooxygenase II "Selective" Inhibitor Celecoxib
  5. 2ax2 - Production and X-Ray Crystallographic Analysis of Fully Deuterated Human Carbonic Anhydrase II
  6. 2axr - Crystal Structure Of Glucooligosaccharide Oxidase From Acremonium Strictum: A Novel Flavinylation of 6-S-Cysteinyl, 8ALPHA-N1-Histidyl Fad
  7. 2ayd - Crystal Structure of the C-Terminal Wrky Domainof ATWRKY1, An Sa-Induced and Partially NPR1-Dependent Transcription Factor
  8. 2ayi - Wild-Type Ampt From Thermus Thermophilus
  9. 2ayj - Solution Structure of 50S Ribosomal Protein L40E From Sulfolobus Solfataricus
  10. 2ayk - Inhibitor-Free Catalytic Fragment of Human Fibroblast Collagenase, uc(Nmr), Minimized Average Structure
  11. 2ays - A Conserved Non-Metallic Binding Site in The C-Terminal Lobe Of Lactoferrin: Structure Of the Complex Of C-Terminal Lobe of Bovine Lactoferrin With N-Acetyl Galactosamine At 1.86 A Resolution
  12. 2az4 - Crystal Structure Of A Protein of Unknown Function From Enterococcus Faecalis V583
  13. 2azh - Solution Structure of Iron-Sulfur Cluster Assembly Protein Sufu From Bacillus Subtilis, With Zinc Bound At the Active Site. Northeast Structural Genomics Consortium Target SR17
  14. 2b0o - Crystal Structure of UPLC1 Gap Domain
  15. 2b0p - Truncated S. Aureus Lytm, P212121 Crystal Form
  16. 2b0z - Crystal Structure of the Protein-Protein Complex Between F82I Cytochrome C and Cytochrome C Peroxidase
  17. 2b10 - Crystal Structure of the Protein-Protein Complex Between F82S Cytochrome C and Cytochrome C Peroxidase
  18. 2b11 - Crystal Structure of the Protein-Protein Complex Between F82W Cytochrome C and Cytochrome C Peroxidase
  19. 2b12 - Crystal Structure of the Protein-Protein Complex Between F82Y Cytochrome C and Cytochrome C Peroxidase
  20. 2b13 - Truncated S. Aureus Lytm, P41 Crystal Form
  21. 2b3j - Crystal Structure of Staphylococcus Aureus Trna Adenosine Deaminase, Tada, in Complex With Rna
  22. 2b3x - Structure Of An Orthorhombic Crystal Form of Human Cytosolic Aconitase (IRP1)
  23. 2b3z - Crystal Structure of A Bifunctional Deaminase and Reductase Involved in Riboflavin Biosynthesis
  24. 2b44 - Truncated S. Aureus Lytm, P 32 2 1 Crystal Form
  25. 2b4y - Crystal Structure of Human Sirtuin Homolog 5
  26. 2b5l - Crystal Structure of DDB1 in Complex With Simian Virus 5 V Protein
  27. 2b5w - Crystal Structure of D38C Glucose Dehydrogenase Mutant From Haloferax Mediterranei
  28. 2b63 - Complete Rna Polymerase II-Rna Inhibitor Complex
  29. 2b65 - Crystal Structure Of the Complex Of C-Lobe of Bovine Lactoferrin With Maltose At 1.5A Resolution
  30. 2b83 - A Single Amino Acid Substitution in the Clostridium Beijerinckii Alcohol Dehydrogenase Is Critical For Thermostabilization
  31. 2b8k - 12-Subunit Rna Polymerase II
  32. 2b8o - Crystal Structure of Glu-Gly-Arg-Chloromethyl Ketone-Factor Viia/Soluble Tissue Factor Complex
  33. 2b8t - Crystal Structure of Thymidine Kinase From U.Urealyticum in Complex With Thymidine
  34. 2b9d - Crystal Structure of Hpv E7 CR3 Domain
  35. 2ba1 - Archaeal Exosome Core
  36. 2bai - The Zinc Finger Domain of Mengovirus Leader Polypeptide
  37. 2bb0 - Structure of Imidazolonepropionase From Bacillus Subtilis
  38. 2bbf - Crystal Structure of Trna-Guanine Transglycosylase (Tgt) From Zymomonas Mobilis in Complex With 6-Amino-3,7-Dihydro-Imidazo[4,5- G]Quinazolin-8-One
  39. 2bc2 - Metallo Beta-Lactamase II From Bacillus Cereus 569/H/9 At pH 6.0, Trigonal Crystal Form
  40. 2bcn - Solvent Isotope Effects on Interfacial Protein Electron Transfer Between Cytochrome C and Cytochrome C Peroxidase
  41. 2bco - X-Ray Structure of Succinylglutamate Desuccinalase From Vibrio Parahaemolyticus (Rimd 2210633) At the Resolution 2.3 A, Northeast Structural Genomics Target VPR14
  42. 2bdh - Human Kallikrein 4 Complex With Zinc and P-Aminobenzamidine
  43. 2be5 - Crystal Structure of the T. Thermophilus Rna Polymerase Holoenzyme in Complex With Inhibitor Tagetitoxin
  44. 2be7 - Crystal Structure Of The Unliganded (T-State) Aspartate Transcarbamoylase of the Psychrophilic Bacterium Moritella Profunda
  45. 2be9 - Crystal Structure of The Ctp-Liganded (T-State) Aspartate Transcarbamoylase From the Extremely Thermophilic Archaeon Sulfolobus Acidocaldarius
  46. 2bed - Structure of Fpt Bound to Inhibitor SCH207736
  47. 2bf9 - Anisotropic Refinement of Avian (Turkey) Pancreatic Polypeptide At 0.99 Angstroms Resolution.
  48. 2bfk - Bacillus Cereus Metallo-Beta-Lactamase (Bcii) Arg (121) Cys Mutant. Solved At PH7 Using 20MM ZNSO4 in Buffer. 1MM Dtt Was Used As A Reducing Agent
  49. 2bfl - Bacillus Cereus Metallo-Beta-Lactamase (Bcii) Arg (121) Cys Mutant. Solved At PH5 Using 20MM ZNSO4 in Buffer. 1MM Dtt Was Used As A Reducing Agent.
  50. 2bfz - Bacillus Cereus Metallo-Beta-Lactamase (Bcii) Arg (121) Cys Mutant. Solved At PH4.5 Using 20MM ZNSO4 in Buffer. 1MM Dtt Was Used As A Reducing Agent. CYS221 Is Oxidized.


Acknowledgement

We would like to acknowledge that these pictures of PDB structures of Zinc coordination spheres were produced with valuable advice from our colleagues from http://3dpdb.com.
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