Chemical elements
  Zinc
    Isotopes
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    Physical Properties
    Chemical Properties
    PDB 12ca-1ai0
    PDB 1aiy-1b6z
    PDB 1b71-1bs8
    PDB 1bsk-1cao
    PDB 1caq-1ctt
    PDB 1ctu-1de6
    PDB 1def-1dy0
    PDB 1dy1-1ed6
    PDB 1ed8-1exk
    PDB 1eyf-1fj9
    PDB 1fjg-1g0e
    PDB 1g0f-1gkq
    PDB 1gkr-1ha5
    PDB 1hbm-1hso
    PDB 1hsz-1i6v
    PDB 1i73-1im5
    PDB 1iml-1jcv
    PDB 1jcz-1jy8
    PDB 1jyb-1kh4
    PDB 1kh5-1kys
    PDB 1kzo-1llm
    PDB 1llu-1m7j
    PDB 1m9j-1mwo
    PDB 1mwq-1ndv
    PDB 1ndw-1nyq
    PDB 1nyr-1os4
    PDB 1os9-1p9w
    PDB 1paa-1pud
    PDB 1pv8-1q9l
    PDB 1q9m-1qv6
    PDB 1qv7-1r6o
    PDB 1r79-1ro9
    PDB 1ror-1sfo
    PDB 1sg0-1t3k
    PDB 1t4k-1tkh
    PDB 1tkj-1u0l
    PDB 1u10-1ums
    PDB 1umt-1v67
    PDB 1v6g-1vrq
    PDB 1vs0-1wew
    PDB 1wfe-1wwf
    PDB 1wwg-1xb1
    PDB 1xb8-1xpz
    PDB 1xq0-1y5w
    PDB 1y5x-1ylk
    PDB 1ylo-1z8r
      1ylo
      1ylv
      1ym3
      1yme
      1yn4
      1ynj
      1ynn
      1ynw
      1yo0
      1yo1
      1yo2
      1yo7
      1yop
      1you
      1yov
      1yp1
      1yqd
      1yqn
      1yqx
      1yqy
      1ysb
      1ysd
      1yso
      1yt3
      1yui
      1yuj
      1yvg
      1yw4
      1yws
      1yxp
      1z05
      1z1l
      1z1n
      1z1w
      1z2l
      1z3a
      1z3i
      1z3j
      1z5h
      1z5r
      1z60
      1z6r
      1z6u
      1z7h
      1z83
      1z84
      1z8i
      1z8j
      1z8l
      1z8r
    PDB 1z93-1zkx
    PDB 1zl6-258l
    PDB 2a03-2afo
    PDB 2afs-2atq
    PDB 2au3-2bfz
    PDB 2bg2-2c3a
    PDB 2c4r-2cij
    PDB 2cim-2czr
    PDB 2d0w-2djw
    PDB 2dkc-2e1b
    PDB 2e1s-2eer
    PDB 2eex-2em4
    PDB 2em5-2eoj
    PDB 2eok-2erq
    PDB 2esf-2fa7
    PDB 2fac-2fpx
    PDB 2fqp-2g84
    PDB 2g87-2gvf
    PDB 2gvi-2han
    PDB 2hap-2huc
    PDB 2hue-2imc
    PDB 2imr-2j65
    PDB 2j6a-2jq5
    PDB 2jr7-2kfn
    PDB 2kft-2l75
    PDB 2lgv-2nx9
    PDB 2nxa-2oc8
    PDB 2occ-2osm
    PDB 2oso-2p53
    PDB 2p57-2pow
    PDB 2ppb-2q8j
    PDB 2qa1-2qp6
    PDB 2qpj-2r71
    PDB 2r74-2sod
    PDB 2srt-2v86
    PDB 2v87-2vp7
    PDB 2vpb-2vyo
    PDB 2vz5-2wey
    PDB 2wfq-2wx0
    PDB 2wx1-2xam
    PDB 2xan-2xr9
    PDB 2xrg-2ytd
    PDB 2yte-2z30
    PDB 2z3g-2zet
    PDB 2zh0-3a32
    PDB 3a36-3aoi
    PDB 3at1-3bk1
    PDB 3bk2-3byr
    PDB 3byw-3cia
    PDB 3ciz-3d08
    PDB 3d09-3dbu
    PDB 3dc3-3dp6
    PDB 3dpe-3e1w
    PDB 3e1z-3ebh
    PDB 3ebi-3epk
    PDB 3epl-3f28
    PDB 3f2b-3fhe
    PDB 3fhp-3ful
    PDB 3fum-3g9y
    PDB 3ga3-3gpu
    PDB 3gpx-3h2w
    PDB 3h3e-3hfy
    PDB 3hgz-3hsn
    PDB 3hso-3i8v
    PDB 3i9b-3ij6
    PDB 3ijf-3ixe
    PDB 3iz0-3k34
    PDB 3k35-3kiy
    PDB 3kj1-3kvt
    PDB 3kwa-3lat
    PDB 3lcn-3lrr
    PDB 3ls1-3m1n
    PDB 3m1v-3mek
    PDB 3men-3mru
    PDB 3ms0-3n63
    PDB 3n64-3nin
    PDB 3nis-3ny2
    PDB 3ny3-3ohc
    PDB 3ohd-3oyl
    PDB 3oym-3pih
    PDB 3pki-3r0d
    PDB 3rj7-3t74
    PDB 3t87-3u9g
    PDB 3ua7-3v24
    PDB 3v25-4agl
    PDB 4agm-4dih
    PDB 4dii-4efs
    PDB 4eg2-4fc8
    PDB 4fgm-6tli
    PDB 6tmn-9nse

Zinc in PDB, part 46 (2251-2300), PDB files 1ylo - 1z8r






Experimental structures of coordination spheres of Zinc (Zn) in bioorganic molecules from X-Ray and NMR experiments. Coordination spheres were calculated with 5.0 Angstroms radius around Zinc atoms.
PDB files 2251-2300 (1ylo - 1z8r):
  1. 1ylo - Crystal Structure Of Protein of Unknown Function (Possible Aminopeptidase) S2589 From Shigella Flexneri 2A Str. 2457T
  2. 1ylv - Schiff-Base Complex of Yeast 5-Aminolaevulinic Acid Dehydratase With Laevulinic Acid
  3. 1ym3 - Crystal Structure of Carbonic Anhydrase RV3588C From Mycobacterium Tuberculosis
  4. 1yme - Structure of Carboxypeptidase
  5. 1yn4 - Crystal Structures of Eap Domains From Staphylococcus Aureus Reveal An Unexpected Homology to Bacterial Superantigens
  6. 1ynj - Taq Rna Polymerase-Sorangicin Complex
  7. 1ynn - Taq Rna Polymerase-Rifampicin Complex
  8. 1ynw - Crystal Structure of Vitamin D Receptor and 9-Cis Retinoic Acid Receptor Dna-Binding Domains Bound to A DR3 Response Element
  9. 1yo0 - Proton Transfer From HIS200 in Human Carbonic Anhydrase II
  10. 1yo1 - Proton Transfer From HIS200 in Human Carbonic Anhydrase II
  11. 1yo2 - Proton Transfer From HIS200 in Human Carbonic Anhydrase II
  12. 1yo7 - Re-Engineering Topology of the Homodimeric Rop Protein Into A Single-Chain 4-Helix Bundle
  13. 1yop - The Solution Structure of KTI11P
  14. 1you - Crystal Structure Of the Catalytic Domain of Mmp-13 Complexed With A Potent Pyrimidinetrione Inhibitor
  15. 1yov - Insights Into The Ubiquitin Transfer Cascade From The Refined Structure of the Activating Enzyme For NEDD8
  16. 1yp1 - Crystal Structure Of A Non-Hemorrhagic Fibrin(Ogen)Olytic Metalloproteinase From Venom of Agkistrodon Acutus
  17. 1yqd - Sinapyl Alcohol Dehydrogenase Complexed With Nadp+
  18. 1yqn - E. Coli Ispf Double Mutant
  19. 1yqx - Sinapyl Alcohol Dehydrogenase At 2.5 Angstrom Resolution
  20. 1yqy - Structure of B. Anthrax Lethal Factor in Complex With A Hydroxamate Inhibitor
  21. 1ysb - Yeast Cytosine Deaminase Triple Mutant
  22. 1ysd - Yeast Cytosine Deaminase Double Mutant
  23. 1yso - Yeast Cu, Zn Superoxide Dismutase With the Reduced Bridge Broken
  24. 1yt3 - Crystal Structure of Escherichia Coli Rnase D, An Exoribonuclease Involved in Structured Rna Processing
  25. 1yui - Solution uc(Nmr) Structure of the Gaga Factor/Dna Complex, Regularized Mean Structure
  26. 1yuj - Solution uc(Nmr) Structure of the Gaga Factor/Dna Complex, 50 Structures
  27. 1yvg - Structural Analysis Of the Catalytic Domain of Tetanus Neurotoxin
  28. 1yw4 - Crystal Structure of the Succinylglutamate Desuccinylase From Chromobacterium Violaceum, Northeast Structural Genomics Target CVR22.
  29. 1yws - Solution Structure of YBL071W-A From Saccharomyces Cerevisiae.
  30. 1yxp - Hiv-1 Dis Rna Subtype F- Zn Soaked
  31. 1z05 - Crystal Structure Of the Rok Family Transcriptional Regulator, Homolog of E.Coli Mlc Protein.
  32. 1z1l - The Crystal Structure of the Phosphodiesterase 2A Catalytic Domain
  33. 1z1n - Crystal Structure of the Sixteen Heme Cytochrome From Desulfovibrio Gigas
  34. 1z1w - Crystal Structures of the Tricorn Interacting Facor F3 From Thermoplasma Acidophilum, A Zinc Aminopeptidase in Three Different Conformations
  35. 1z2l - Crystal Structure of Allantoate-Amidohydrolase From E.Coli K12 in Complex With Substrate Allantoate
  36. 1z3a - Crystal Structure of Trna Adenosine Deaminase Tada From Escherichia Coli
  37. 1z3i - Structure Of the SWI2/SNF2 Chromatin Remodeling Domain of Eukaryotic RAD54
  38. 1z3j - Solution Structure Of MMP12 in the Presence of N-Isobutyl-N- 4-Methoxyphenylsulfonyl]Glycyl Hydroxamic Acid (Nngh)
  39. 1z5h - Crystal Structures of the Tricorn Interacting Factor F3 From Thermoplasma Acidophilum
  40. 1z5r - Crystal Structure of Activated Porcine Pancreatic Carboxypeptidase B
  41. 1z60 - Solution Structure Of the Carboxy-Terminal Domain of Human Tfiih P44 Subunit
  42. 1z6r - Crystal Structure of Mlc From Escherichia Coli
  43. 1z6u - NP95-Like Ring Finger Protein Isoform B [Homo Sapiens]
  44. 1z7h - 2.3 Angstrom Crystal Structure of Tetanus Neurotoxin Light Chain
  45. 1z83 - Crystal Structure of Human AK1A in Complex With AP5A
  46. 1z84 - X-Ray Structure of Galt-Like Protein From Arabidopsis Thaliana AT5G18200
  47. 1z8i - Crystal Structure of the Thrombin Mutant G193A Bound to Ppack
  48. 1z8j - Crystal Structure of the Thrombin Mutant G193P Bound to Ppack
  49. 1z8l - Crystal Structure of Prostate-Specific Membrane Antigen, A Tumor Marker and Peptidase
  50. 1z8r - 2A Cysteine Proteinase From Human Coxsackievirus B4 (Strain Jvb / Benschoten / New York / 51)


Acknowledgement

We would like to acknowledge that these pictures of PDB structures of Zinc coordination spheres were produced with valuable advice from our colleagues from http://3dpdb.com.
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